Pectobacterium atrosepticum SCRI1043: ECA3830
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Entry
ECA3830 CDS
T00186
Name
(GenBank) putative AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
eca
Pectobacterium atrosepticum SCRI1043
Pathway
eca00061
Fatty acid biosynthesis
eca00071
Fatty acid degradation
eca01100
Metabolic pathways
eca01212
Fatty acid metabolism
eca02024
Quorum sensing
eca04146
Peroxisome
Module
eca_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
eca00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
ECA3830
00071 Fatty acid degradation
ECA3830
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
ECA3830
09145 Cellular community - prokaryotes
02024 Quorum sensing
ECA3830
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
eca01004
]
ECA3830
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
eca04147
]
ECA3830
Enzymes [BR:
eca01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
ECA3830
Lipid biosynthesis proteins [BR:
eca01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
ECA3830
Exosome [BR:
eca04147
]
Exosomal proteins
Exosomal proteins of breast milk
ECA3830
Exosomal proteins of breast cancer cells
ECA3830
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
CAG76728
UniProt:
Q6D0G9
LinkDB
All DBs
Position
complement(4279945..4281750)
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AA seq
601 aa
AA seq
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MNNHLQPYHVVHRVQDQINHCAGRITLREWTPAGEQQLTWTQAGQRIQRIASGLLALGLD
VQERVAIFSHNSMNWSLADLALLHLRAISVPIYATNTTAQAAFIINDADIRTIFVGGQEQ
LDALLALRDTCPQLRNIIVMDKDVNLRGSDIVQSLHEFEAQAVDDFWRDEWQTRIDSRDL
NDLFTLIYTSGTTGEPKGVMLDYTNMAMQLKLHDDRLSMSANDVSLCFLPLSHVFERAWS
FVVMHCGAQNVYLSDTNLVRGAMLAVKPTVMCAVPRFYEKVYSAIHEKVAQAPWYRQRLF
NWAIAQGQHAFLASNTTKKGGLFRRVMHHYADRLVLGKLRQLLGGEIRFMPAAGARLDDN
IILFFRSIGIRIIYGYGMTETCATVSCWEEGRFRLGSIGTPLPGIEVRIGEEKEIQVRGA
TIMRGYFHRPQETAETFTEDGWLKTGDAGELDANGNLFITERLKDLMKTSGGKYIAPQHL
EGTLGQDRFIEQVAIIADTRKYVSALIVPCFDALEEYAHSINLKYHDRLELLRHSHIIEL
FEQRLREMQKELSRVEQVKKFTLLPVPFSMAEGELTPTLKLRRKIINQRYQLEIDAMYVE
S
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgaataatcatttacagccataccatgtggttcaccgggttcaagatcagatcaatcac
tgcgcaggtcgtattaccttgcgcgagtggacgcctgcgggcgaacagcagctcacctgg
acacaggctgggcagcgcattcaacgcattgccagtgggctattggcgctggggctggat
gttcaggaacgggttgcgattttctcgcataactcaatgaattggtcgctggctgacctg
gcactgctgcacctgcgggcgatcagcgtgccaatctatgccacgaatacgacagcgcag
gcggcattcataatcaatgatgccgatatccgtacgatattcgtcggcggtcaggaacag
ttggatgcactgctagcgctacgcgatacctgtccacagttgcgaaatatcattgtgatg
gataaagacgtcaatctgcgtggtagcgatattgtgcaatcgctgcatgagtttgaagcg
caggccgtagacgatttttggcgtgatgaatggcagacgcgcatcgacagccgcgatctc
aacgatctgtttacgctgatttatacctctggcaccaccggtgagccgaaaggcgtcatg
ctggattacaccaacatggcgatgcagcttaagctacacgacgatcgcttaagcatgtcg
gcaaatgatgtctcactctgcttcttaccgctttcccatgtgttcgagcgtgcctggagt
ttcgttgttatgcactgtggcgcacagaacgtgtacctcagcgatacgaatttagtgcgt
ggtgcgatgcttgcggtgaaacctactgtgatgtgcgccgtaccgcgtttttatgagaaa
gtttacagcgcaatccatgaaaaagtggcacaggctccctggtatcgccagcggttgttc
aactgggctattgcgcaggggcaacacgcttttctggctagcaatacgacgaaaaagggc
ggactttttcgccgcgtcatgcatcactatgctgaccggctggtgttagggaaactgcgt
cagcttctggggggggagattcgttttatgcccgcagcgggcgcacggctggatgacaac
attattctgtttttccggtcgatcgggattcgcatcatttatggttacggcatgaccgaa
acctgcgcgacggtttcctgctgggaagaaggccgattccgcttgggctctatcggtacg
ccgctaccgggtattgaggtacgcattggtgaggaaaaagagatccaggtgcgtggcgcg
accatcatgcggggttatttccatcgtccgcaggaaaccgcagaaacctttaccgaagac
ggctggctgaaaaccggcgatgcgggagagctggatgccaacggtaacctgtttattacc
gaacggttgaaagatctgatgaaaacctcaggcggtaaatatatcgcaccgcagcatctg
gaaggcacgcttggacaggatcgttttatcgaacaggttgcgattattgcagacacgcgt
aagtacgtgtctgcactgatcgttccgtgtttcgacgcgttggaagaatacgctcactcc
atcaacttgaagtaccacgatcgtctggagttgctgcgccacagccatattattgaactg
ttcgagcagcgcctgcgggagatgcagaaagagctttcccgcgttgagcaggtgaagaaa
ttcacgttgttgccagtgccgttttcgatggcggaaggggagctgacgccaacgctcaag
ctacgtaggaagatcatcaaccagcgttatcagttggaaattgatgcgatgtacgtagag
tcttga
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