Pectobacterium atrosepticum SCRI1043: ECA3853
Help
Entry
ECA3853 CDS
T00186
Symbol
hepA
Name
(GenBank) RNA polymerase associated protein
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
eca
Pectobacterium atrosepticum SCRI1043
Brite
KEGG Orthology (KO) [BR:
eca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eca03021
]
ECA3853 (hepA)
Transcription machinery [BR:
eca03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
ECA3853 (hepA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
AAA_34
Motif
Other DBs
NCBI-ProteinID:
CAG76751
UniProt:
Q6D0E6
LinkDB
All DBs
Position
4309359..4312262
Genome browser
AA seq
967 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVAVNTRMITLLFPASGENRLYSRSDAPITRVMFNPGDT
VTSHEGWQLKIDDVREEKGLLVYCGQRLDDETPAELREVFLDSKLTFNKPQDRLFAGQID
RMDRFALRYRARKHQNEQALQQWGGLRGMRASLIPHQLHIAYEVGQRHAPRVLLADEVGL
GKTIEAGMIIHQQLLAGRASRVLIVVPETLQHQWLVEMLRRFNLLFSLFDDERYAEAKLD
SSNPFETEQLVICSLGFVQRSAQRFAQLVNTDWDLLVVDEAHHLVWSEESPSPEYQAIEA
LARATPAVLLLTATPEQLGQQSHFARLRLLDPNRFHDYQEFVAEQQQYRPVADAVTLLLA
GEKAQAAELNVLSDLLGEQDIEPLLKSINSDSDDNQKARQELITMLMDRHGTSRVLFRNT
RQGVKGFPQRVLHQIRLPLPAQYQTAIKVSGIMNANKPLETRARDMLYPEQIYQQLEGDD
ATWWNFDPRVEWLLNYLTTNRDEKVLVICAQAATALQLEQVLRTREAIRAAVFHEGLSIL
ERDRAAAYFASEEEGAQVLICSEIGSEGRNFQFASHLVMFDLPFNPDLLEQRIGRLDRIG
QAKEIQVLVPYLENTAQALLVRWYHEGLDAFEHTCPTGRTIYDAHHAQLIERLTTVGEQQ
GLDEFIHTCRQQHDSLKQQLEQGRDRLLEMHSNGGEQAQLLAQAIAEQDNDVNLVTFALN
LFDIVGINQEDRSDNLIILTPSDHMLVPDFPGLPQDGCTITFDRDQALSREDAQFISWEH
PLIRNGLDLVLSGDTGSCAVSLLKNKALPVGTLLAELVYVVEAQAPKHLQLTRFLPPTPV
RLLMDRKGTNLAAQVEFESFNRQLNAVNRHTSSKLVNAVQSDVHAMLQQAEALVETQARQ
LITEAQQQADLQLRRELERLEALKAVNPNIREDELTALENQREQVLSNLHEANWRLDAIR
LVVVTHQ
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcagcgctggatcagcgatacggaaagcgaacttggactggga
acggttgttgccgtcaatacgcgtatgataacgctgcttttccctgccagcggtgaaaac
cgactttattcccgcagtgacgcccccatcacccgtgtgatgttcaatcccggcgacacc
gtcaccagccatgaaggctggcagctcaagattgatgacgtgcgagaagaaaaagggttg
ctggtgtattgcggccaacgcctggacgacgaaacgccagcggaactgcgtgaagtcttt
ctggacagcaaactcacgttcaacaaaccgcaagatcgcctgttcgcaggacagattgat
cgtatggatcgctttgcgctgcgctatcgcgcccgtaagcatcagaacgagcaggcgctg
caacaatggggcggtttgcgcggcatgcgcgccagcctcatcccccaccagcttcacatc
gcttatgaagtcggccaacgccatgcgccacgcgttttgctggcggacgaagtcggtcta
gggaaaaccattgaagccggtatgatcatccaccagcaattgctggcgggtcgtgccagt
cgcgtgctgattgtcgtaccggaaaccctgcaacatcagtggctggttgaaatgctgcgc
cgctttaacctgctgttctcactgtttgacgacgagcgctatgccgaagccaagctggac
agcagcaatccgtttgaaactgaacagttggtgatctgctcgctgggatttgttcaacgc
agcgcccagcgctttgcgcagttagttaacaccgactgggatctgctggtcgtggatgag
gcccaccatctggtctggagtgaagaaagccccagcccggaatatcaggctattgaagcg
ctggcacgcgccactccggccgttttgctattaaccgcaacgccggaacagcttggccag
cagagccactttgcacgcttacgcctgctcgatcccaaccgtttccatgactatcaggaa
ttcgttgccgaacagcagcagtaccgtccggtcgccgatgccgtcacactgctgttagcg
ggtgaaaaagcccaagcggctgaactgaatgtgctaagcgatctgctgggcgaacaggac
attgagccgttgctgaaatccatcaacagcgacagcgatgacaatcagaaggcgcgtcag
gaactgatcaccatgttgatggatcgccacggcaccagccgtgtgttgttccgcaatacg
cgtcagggcgttaaaggcttcccgcagcgtgtcctgcatcaaatccgcctgccgctgcca
gcgcagtaccaaacggcaatcaaagtttccggcattatgaatgcgaacaagccactggaa
acccgcgcgcgcgatatgctgtaccctgagcaaatttatcaacagctcgaaggggacgat
gccacctggtggaacttcgatccgcgcgtggaatggttgctgaactacctgaccaccaac
cgtgatgaaaaagtgttggtgatctgcgcacaggcagcgacagcgctccagttggagcaa
gtgctgcgcacgcgtgaagccattcgcgccgccgtcttccatgaagggctgtctattctg
gaacgtgaccgcgccgccgcctattttgcatctgaagaagaaggcgcacaggtgctgatc
tgttcagagatcggatccgaaggccgtaatttccagtttgccagccatttagtgatgttc
gatctgccgttcaaccccgacttgctggagcagcgtattggccgtctggaccgcatcggg
caggcaaaagaaattcaggttctggtgccgtatctggaaaacaccgcccaggctctgctg
gtacgctggtatcacgaagggctggatgcgtttgagcacacctgcccaacaggtcgcacc
atctatgatgcgcaccatgcacagttaatcgagcgactgacgaccgtcggtgaacagcag
ggactggatgagtttatccatacctgccgccaacagcacgacagcctgaagcaacagctt
gaacaaggtcgcgatcgtctgctggaaatgcattctaacggcggcgaacaggctcagctg
ttggcacaagccattgccgaacaggataatgacgtcaacctggtgacattcgccctgaac
ctgtttgatatcgttggcatcaatcaggaagatcgcagcgataatctgatcattctgaca
ccatccgatcatatgctggtgccggatttccccggtctgccgcaggacggttgtacgatc
accttcgatcgcgatcaggctctctcacgcgaagacgcgcagtttatcagttgggaacac
ccgctcatccgtaacgggctcgatctggtgctgtccggcgataccggaagctgtgcggtt
tccttgctgaaaaataaagcgctgccggtcggtacactgttggcagaactggtttacgtt
gtggaagctcaggcaccaaaacacctgcaactgacccgcttcctgccaccaacaccggtt
cgactgctgatggatcgtaaaggcacgaatctggccgcacaggtggagtttgagagcttt
aaccgtcagctcaatgcggtgaaccgccatacttccagcaagctggtgaatgcagtgcaa
tccgatgttcacgctatgctgcaacaggcagaagcgttggtggaaacgcaggcgcgccag
ctaatcactgaagcgcaacagcaggccgatctgcaactgcgccgcgagctggaacgtctg
gaagcgctgaaagccgtcaatcctaacattcgtgaagatgagctgaccgcgctggaaaat
cagcgcgagcaggtgctgagcaatctgcacgaggccaactggcgtctggatgcgatccgt
ctggtcgtggtaacgcatcagtaa
DBGET
integrated database retrieval system
