Pectobacterium atrosepticum SCRI1043: ECA3934
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Entry
ECA3934 CDS
T00186
Symbol
hfq
Name
(GenBank) putative phage-related protein (host factor-I protein)
KO
K03666
host factor-I protein
Organism
eca
Pectobacterium atrosepticum SCRI1043
Pathway
eca02024
Quorum sensing
eca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECA3934 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ECA3934 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eca03019
]
ECA3934 (hfq)
03036 Chromosome and associated proteins [BR:
eca03036
]
ECA3934 (hfq)
Messenger RNA biogenesis [BR:
eca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ECA3934 (hfq)
Chromosome and associated proteins [BR:
eca03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
ECA3934 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
CAG76831
UniProt:
Q6D067
LinkDB
All DBs
Position
complement(4402540..4402839)
Genome browser
AA seq
99 aa
AA seq
DB search
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVSHHSNNPGGSNNYHGSNTTAQQQSQDADDAE
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggggcaatctttgcaagatccgttcttgaacgctttgcgtcgtgaacgtgtt
ccggtttcgatttatttggtgaacggtattaagttgcaaggtcagatcgagtcttttgat
cagttcgtgattttgttgaaaaacacggtaagtcagatggtttataagcacgccatctct
acagttgttccctctcgcccagtctctcaccatagcaataatccaggcggcagcaacaac
tatcacggtagtaacacgactgctcagcagcagtcgcaggatgctgatgacgccgaataa
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