Pectobacterium atrosepticum SCRI1043: ECA4069
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Entry
ECA4069 CDS
T00186
Symbol
pelC
Name
(GenBank) pectate lyase III
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
eca
Pectobacterium atrosepticum SCRI1043
Pathway
eca00040
Pentose and glucuronate interconversions
eca01100
Metabolic pathways
eca02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
eca00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
ECA4069 (pelC)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ECA4069 (pelC)
Enzymes [BR:
eca01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
ECA4069 (pelC)
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
CAG76966
UniProt:
Q6CZT2
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All DBs
Position
4536014..4537138
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AA seq
374 aa
AA seq
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MKYLLPSTAAGLLLLAAQPTMAANTGGYATTDGGNVAGAVNKTARSMQDIIDIIEEAKLD
SKGKKVKGGAYPLIITYNGNEDALIKAAENNICGQWSKDARGVEIKEFTKGVTIIGTNGS
SANFGIWLTKSSDVIIRNMRFGYMPGGAQDGDAIRIDNTPNVWIDHNEIFAKNFECQGTK
DGDTTFESAIDIKKASTNVTVSYNYIHGIKKVGLSGFSSSDTGRDLTYHHNIYDDVNARL
PLQRGGQVHAYNNLYTGITSSGLNVRQKGIALIERNWFENAKNPVTSRYDGSNFGTWELR
NNNIMSPADFAKYNITWDKDTKAYVNAEDWKSTGTFASVPYSYSPVSPQCVKDKLANYAG
VNKNLAVLTAANCN
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacctactgccttctacagccgctgggctgttattacttgcagcccaaccgacg
atggcggcaaatacggggggttacgctaccactgacggtggtaacgttgccggtgccgtg
aacaaaactgcgcgctctatgcaagatatcattgatattatcgaagaggcgaagctggat
tctaaaggtaagaaagtcaaaggtggggcttacccactcatcatcacctataacggtaat
gaagacgcgctgatcaaagctgctgaaaacaatatctgcggccagtggagtaaagacgct
cgcggtgtggaaatcaaagagtttaccaaaggggttaccatcatcggtaccaacggatct
tccgctaacttcgggatctggctgacaaaatcatctgatgtcatcatacgcaacatgcgc
tttggttacatgccgggtggcgcgcaggacggtgatgccattcgtatcgataacacgccg
aacgtttggattgaccacaacgagatcttcgctaaaaactttgaatgtcagggcacaaaa
gacggtgacaccaccttcgaatctgcgattgatatcaagaaagcttctaccaacgtgacg
gtgtcgtacaactacattcacggcatcaaaaaggtgggactgagcggcttcagcagcagc
gatacgggccgtgatctgacttaccatcacaatatttacgacgacgttaacgcccgtctc
ccactgcaacgcggcggtcaggttcacgcttacaacaacctgtataccggcatcaccagt
tctggcctgaacgtacgccagaaagggattgcgctgatcgaacgtaactggttcgagaat
gcgaaaaacccggtgacctcacgttacgacggttccaacttcggtacctgggaactgcgt
aataacaacatcatgagcccagccgacttcgctaaatataatatcacttgggataaagac
accaaagcctacgtgaatgctgaagactggaaaagcaccggcacgttcgcttctgttcct
tacagctactctccggtttcaccacagtgcgtgaaggacaaactggcaaactatgctggt
gtgaacaaaaacctggccgtgctgacagcagcaaattgcaactaa
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