Pectobacterium atrosepticum SCRI1043: ECA4114
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Entry
ECA4114 CDS
T00186
Name
(GenBank) putative lysine/ornithine decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
eca
Pectobacterium atrosepticum SCRI1043
Pathway
eca00300
Lysine biosynthesis
eca00470
D-Amino acid metabolism
eca01100
Metabolic pathways
eca01110
Biosynthesis of secondary metabolites
eca01120
Microbial metabolism in diverse environments
eca01230
Biosynthesis of amino acids
Module
eca_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
eca00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ECA4114
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ECA4114
Enzymes [BR:
eca01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
ECA4114
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
QRPTase_C
Motif
Other DBs
NCBI-ProteinID:
CAG77011
UniProt:
Q6CZN7
LinkDB
All DBs
Position
complement(4584913..4586316)
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AA seq
467 aa
AA seq
DB search
MSNLFSFAAVSSPAVTQAHWPERLTPYLDSEIEQFLFNSPQRLSWLVEQYGSPLNIVWPH
TVTNNIAALRTVLQRHDVDCRLYYGAKVNKSPGLVQAAVNAGIGVDVSSLQELKDALRAG
CDGARLCATGPAKTREFLTELVHHRALIVLDSPEEFDDVLALAALLRVTKPVRVLLRYRP
SFAQASRFGMLADEVARCLETLSTRQDVLHLEGFHFHLGGYAPDTRVAALAEVLPLLERA
RSRGLQPTMIDIGGGLPIQYLSASRYQAYLAEQNEADYRHGQVPTSFYPYGGERSAADYL
EAFLSASIGQHCVANILKQHGLILAIEPGRSLADQSAITVFRVTRTRRQPDGNHVVFVEG
SSFSACETWFNSEFLIDPLHVFSVKKDTRPTPGKAWIAGHSCLDDDVITNRLIHFQTVPQ
PGDLLIYANTAGYQMDLLENAFHRHPLPARLCAFKGKKGELIFSSDN
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacctgtttagctttgccgcagtgtcttcccccgctgtcacgcaggcccactgg
cctgaaagactgacgccttatctggatagtgagattgagcagttccttttcaactcgccg
caaaggctgtcatggctggttgagcagtatgggtcgccattgaatattgtctggccgcac
accgttaccaacaatatcgcggcattgcgaaccgtgttgcagcgtcacgatgtggactgc
cgcctgtactacggcgcgaaggtgaacaaatcaccggggctggtacaggcggctgtcaac
gcgggcatcggcgtggatgtctccagcttgcaggaactgaaagatgccctgcgagcaggc
tgcgacggcgcgcggctgtgcgccaccggcccggcaaaaacgcgcgagtttctgactgag
ctggttcatcatcgtgcgcttatcgtgctggattcaccggaagagttcgacgacgtgctg
gcgttggcggcgttgttgcgcgtgacgaaaccggtgcgggtactgctgcgctatcgcccg
tcgttcgcacaggccagccgttttggcatgttggccgatgaagtcgcacgctgtctggag
acgttaagcaccagacaggatgtgcttcatcttgaaggcttccatttccatctgggcggc
tatgctcccgatacacgcgtggccgcattggctgaggtgctgccattactggagcgggcg
cggtcacggggtttgcagcccactatgattgatatcggcggtggattgccgattcaatat
ctttccgcttctcgctatcaggcatatttggcggagcagaatgaggcggattaccgccac
ggtcaggtgccgacctcgttttacccgtatggcggcgagcgctcggcagccgactatctt
gaggcattcttgtcagcctcaatcgggcagcattgcgtggcgaacatactaaaacagcac
ggcctgattctggccattgagccggggcgcagtctggccgaccaaagtgcgattaccgtg
tttcgcgtcacgcgaacgcgccgtcagccggatggcaaccacgtcgtgtttgtcgaaggt
agcagctttagcgcgtgcgagacttggtttaactctgagtttttgattgatcctctgcat
gttttttccgtcaaaaaagacacacgtccgacgcctggtaaagcctggatcgccggacac
agctgtctggacgacgatgtcattacgaaccgattgattcattttcaaaccgtgccgcag
ccaggcgatttactgatttacgcgaatacggcgggataccagatggacctgctggagaac
gcgtttcatcggcatccgctgcctgcgcgcctgtgtgctttcaaaggtaagaaaggtgag
ctgattttttccagtgataactga
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