Pectobacterium atrosepticum SCRI1043: ECA4179
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Entry
ECA4179 CDS
T00186
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
eca
Pectobacterium atrosepticum SCRI1043
Pathway
eca03420
Nucleotide excision repair
eca03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ECA4179 (uvrD)
03430 Mismatch repair
ECA4179 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eca03400
]
ECA4179 (uvrD)
Enzymes [BR:
eca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ECA4179 (uvrD)
DNA repair and recombination proteins [BR:
eca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ECA4179 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
ECA4179 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_22
PhoH
Reg_prop
Motif
Other DBs
NCBI-ProteinID:
CAG77076
UniProt:
Q6CZH2
LinkDB
All DBs
Position
complement(4670269..4672431)
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSDLLDGLNDKQRAAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLLSVENCSPYSIMAV
TFTNKAAAEMRHRINHLIGTSQGGMWIGTFHGLAHRLLRAHHMDANLPQDFQILDSDDQL
RLLKRLIRALNLDEKQWPPRQAMWFINGKKDEGLRPQHIESYGNPIEQTWQRVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHVLNHYRERFTNILVDEFQDTNRIQYAWIHMLAGDS
AKVMIVGDDDQSIYGWRGAQVENIQLFLKDFAGAETIRLEQNYRSTSNILKAANALIAHN
GGRLGKNLWTEGVEGEPISLYCAFNELDEARYVVNRIKAWQEKGGVLKDNAILYRSNAQS
RVLEEALLQQSMPYRIYGGMRFFERQEIRDSLSYLRLISNRNDDAAFERVVNTPTRGIGD
RTLDVVRQTARDRQLTLWQSTRVLLQEKVLAGRAAASLQRFVELIDALAYETSELPLHVQ
TDRAIKDSGLWSMYEQEKGEKGQARVENLEELVTATRQFSYQEEDQDLMPLQAFLSHAAL
EAGEGQADANQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMEKLTITYAESRRLYGKEAYHRPSRFVGELPEECVEEVRLRASVSRPVNHQRLG
TPITENDSGYKLGQRVRHAKFGEGTIVNLEGSGEHARLQVAFQGQGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgatctgctcgatggcctcaacgacaaacagcgtgccgcggtagccgcg
ccgcgcagcaatttattggtgctggcaggggcgggcagcggcaagactcgggtactggtt
catcgtattgcctggttattgtccgtcgaaaactgttcgccgtactccatcatggcggtg
acgtttaccaacaaagccgcggcagagatgcgtcatcgtatcaaccatctgatcggtacc
agtcagggaggcatgtggattggcacctttcacggattggcacaccgtctgctgcgtgcg
caccatatggatgccaatctgccgcaggatttccagattctggacagcgacgatcagttg
cgcctgttgaaacgactgattcgggcgctgaatctggatgagaagcagtggccgccgcgt
caggcgatgtggttcatcaacggtaagaaagacgaaggtttacgtccgcagcacattgaa
agctacggcaaccctatcgagcaaacgtggcagcgtgtctatcaggcttatcaggaagcg
tgcgatcgcgctggactggtggatttcgccgaactgctgctgcgcgcgcatgaactgtgg
ctgaacaaaccgcatgtgctgaaccactatcgtgagcgttttaccaatattctggtggac
gaatttcaggataccaaccgcattcagtacgcttggatccacatgttggcgggcgatagc
gccaaggtgatgatcgttggagatgacgatcagtcgatttacggctggcgtggggcgcag
gtcgaaaatattcagctgttcctgaaagatttcgccggcgcagaaacaatccgtctggag
cagaactatcgttcgaccagcaatattctgaaagcggcgaatgccctgattgcccacaac
ggcgggcggctcggcaagaacctatggacggaaggtgtcgagggcgaacctatttcgctt
tactgcgcattcaacgaactggatgaggcacgttacgtcgttaaccgaattaaagcctgg
caggaaaagggtggtgtgctgaaagataacgccattctgtatcggagcaacgcccagtcg
cgcgtattggaagaggcgctgttgcagcagagtatgccataccgcatctacggcggaatg
cgcttcttcgaacgtcaggaaattagagattcgctatcttatctgcgtctcatctccaat
cgtaatgacgatgcggcgttcgagcgtgtggtgaatacgccgacgcgcggcattggcgat
cgcacgctggacgtggtgcgtcagacggcgcgcgatcgtcaactgacgctgtggcaatcc
acgcgggtgctgttgcaagagaaagtgctggctgggcgtgcggcggcatcactgcaacgc
tttgtcgaattgatcgatgcgctggcctatgaaacgtctgaactgccgctgcatgtgcaa
accgaccgggcgattaaagattctggcctgtggagtatgtacgaacaggaaaaaggcgag
aaagggcaggcacgagtagaaaacctggaggaactggtgacggctacgcgccagttcagc
tatcaggaagaagatcaggatctgatgccgcttcaggcattcctgtcacatgccgcgctg
gaagcgggtgaaggtcaggcggatgccaatcaggacgcggtgcagcttatgacgctgcac
tcggcgaaagggctggaattcccgcaggtgtttatcgtcggtatggaagaaggcatgttc
cccagccagatgtcgctggatgaaggtgggcgtctggaagaagaacgtcgtctggcttat
gttggcgtcacgcgcgcaatggaaaagctgacgataacctacgccgaatcccgccgttta
tacggcaaggaagcctatcatcggccttcccgattcgtcggtgaactgcctgaagaatgc
gttgaagaggtgcggttacgtgccagcgtctcccgcccggtcaatcaccagcgccttggc
acgccgataacggaaaatgacagcggctacaagctgggacaacgggttcgccatgcgaaa
ttcggcgaaggcaccatcgtgaatctggaaggcagcggtgagcacgcccgtcttcaggtc
gcgtttcagggacagggtattaaatggctggttgccgcctacgccagactggaaacggtg
tga
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