Pectobacterium atrosepticum SCRI1043: ECA4259
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Entry
ECA4259 CDS
T00186
Symbol
cytR
Name
(GenBank) transcriptional repressor
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
eca
Pectobacterium atrosepticum SCRI1043
Brite
KEGG Orthology (KO) [BR:
eca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eca03000
]
ECA4259 (cytR)
Transcription factors [BR:
eca03000
]
Prokaryotic type
Helix-turn-helix
LacI family
ECA4259 (cytR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
TetR_N
HTH_91
AIRS
HTH_Crp_2
DUF3606
Motif
Other DBs
NCBI-ProteinID:
CAG77156
UniProt:
Q6CZ94
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All DBs
Position
4773468..4774511
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AA seq
347 aa
AA seq
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MKQKKGVTTATMKNVADEAGVSTATVSRTLMNPEKVSATTRRKVEQAVIAVGYSPHALNR
NLKRNESRTILTIVPDICDPYFSEIFRGIEETAAEHGYLVLIGDCAHQHQREKTFVDLII
TKQIDGMVLLGSNLPFDAGQEEQRNLPPMVMANEFSPDLALPTVHIDNLTAAFEAVHYLH
QAGHQRIACIAGPEHMHLSQYRLQGYIQALRRNGILIDNQYIFRGDFTYKTGINGLIALM
QHPQPPSAIFCHSDLMALGVLTQARKMGLDIPRDLSIIGFDDIEQAQYCWPPLTSVAQPR
YQIGREAMLLLLEQLQGNTVQSGSRLLSSELVIRDSVAAPNYARNRL
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
ttgaagcagaagaaaggcgtcaccacggcgacgatgaaaaacgtggcggatgaggcgggc
gtttccaccgccaccgtatcccgaacgttaatgaacccagagaaagtctctgcgaccacc
cgcaggaaggtcgagcaggctgtcatcgccgttggctattcgcctcacgcactcaacaga
aatctcaagcgtaacgaatcacgtacgatcctgacgatcgtgccagatatctgtgatcct
tatttctccgaaatatttcgtgggatcgaagaaacagccgccgaacacggctacctcgtg
ttgattggcgattgcgctcaccagcatcaaagggaaaaaaccttcgtcgatctaattatt
accaaacagatcgacggcatggtgttgctcggctcgaatctgccgtttgatgcaggccag
gaagagcagcgtaatttgccaccgatggtgatggcgaatgagttctcaccggatctggcg
ctaccaaccgtgcatatcgataatctgaccgccgcctttgaagccgtacactatttacat
caggcaggtcatcagcgcatcgcctgcattgcgggcccagagcacatgcatctgagtcaa
tatcgcctacagggatatattcaggccctgcgacgcaatggaattctcatcgataatcaa
tacatctttcggggtgatttcacttacaaaaccgggatcaacggcctgattgcgctgatg
caacatccacagccgcctagcgccatcttctgtcatagcgatctcatggcgctgggcgta
ctgacgcaggccagaaaaatggggctggacatcccgcgtgatctctccattatcggtttc
gacgatatagaacaagcgcaatactgctggcctcctctgacttctgtcgcccaaccacgt
tatcagatcggacgcgaggcaatgctgctactcttagagcagttgcaaggtaacacggta
caaagcggttcccgtctgttgtccagtgaactggtcatacgcgacagtgtcgccgcaccg
aattacgcccgtaacaggctttaa
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