Pectobacterium atrosepticum SCRI1043: ECA4381
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Entry
ECA4381 CDS
T00186
Name
(GenBank) putative DNA-binding protein
KO
K23015
GntR family transcriptional regulator, transcriptional activator for L-galactonate catabolism
Organism
eca
Pectobacterium atrosepticum SCRI1043
Brite
KEGG Orthology (KO) [BR:
eca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eca03000
]
ECA4381
Transcription factors [BR:
eca03000
]
Prokaryotic type
Helix-turn-helix
GntR family
ECA4381
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GntR
FCD
HTH_Crp_2
Rrf2
HVO_A0261_N
HTH_24
HTH_11
CENP-B_N
Phage_rep_O
HTH_IclR
HTH_36
HTH_5
RP-C
HTH_DeoR
TrmB
MarR_2
HTH_28
Motif
Other DBs
NCBI-ProteinID:
CAG77277
UniProt:
Q6CYX4
LinkDB
All DBs
Position
complement(4913050..4913964)
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AA seq
304 aa
AA seq
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MSRSQNLRHNVINQIIDDMARGHIPSPLPSQNALAEMYNISRTTVRHILAHLRDCGVLTQ
VSSDYVIARKPDHDDGFTCITAPMDEQNRIFEQAFFTMINQRQLRVGETFSELQLARDAG
VSPVVVREYLLKFGRYNLIQNEKRGQWSMKEFDQAYAEQLFELREMLETHALQHFLNLPD
DDPRWLQAKTLLERHRMLRDSIGNSFRMFSQLDRNFHALLLSAAENVFFDQSLEIISVIF
HFHYQWDESDLKQRNIIAIDEHMTILSALICRSDLDATLALRNHLNSAKQSMIRSINQTV
RTDH
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagccgttcgcaaaatttacgtcacaatgtcattaatcagattatcgatgatatggcc
cgcggtcatattccgtcacctctgccgtcgcaaaatgcgctggcggagatgtataacatc
agccgcacaacggtacgccatattctggctcatctgcgcgattgcggcgtgcttacgcag
gttagcagcgattatgtgatcgcccgaaaacccgaccacgacgatgggttcacctgtatt
accgcgccgatggacgagcaaaaccgcattttcgagcaggcatttttcaccatgatcaac
cagcgtcagctccgcgtgggtgagacattctcagagctacaactcgcgcgtgacgccggt
gttagcccagtggtagtgcgtgaatatcttttgaaatttgggcgttacaacctgattcag
aacgaaaaacgtgggcagtggagtatgaaagagttcgatcaggcctatgccgaacagctg
tttgaattgcgggaaatgttggagacgcatgctctgcaacacttcctcaatctgccggat
gatgacccccgctggctacaggctaaaacgttgctggaacgccaccgcatgttacgtgac
agcattggtaacagttttcgtatgttctcgcagctcgaccgtaactttcatgcgctttta
ctttctgctgccgaaaatgtcttttttgatcagtcgcttgaaattatctccgtgatattt
cactttcactaccagtgggatgaaagcgatctcaaacagcgcaacatcatcgcgattgac
gagcacatgaccatcctcagtgcgttgatttgccgaagcgatctggatgccacgctggca
cttcgtaaccatttgaattcagctaaacaatcgatgattcgctcaattaaccagactgtt
cggactgaccattaa
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