Pectobacterium atrosepticum SCRI1043: ECA4438
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Entry
ECA4438 CDS
T00186
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
eca
Pectobacterium atrosepticum SCRI1043
Brite
KEGG Orthology (KO) [BR:
eca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eca03032
]
ECA4438 (gyrB)
03400 DNA repair and recombination proteins [BR:
eca03400
]
ECA4438 (gyrB)
Enzymes [BR:
eca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ECA4438 (gyrB)
DNA replication proteins [BR:
eca03032
]
Prokaryotic type
DNA Topoisomerases
ECA4438 (gyrB)
DNA repair and recombination proteins [BR:
eca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ECA4438 (gyrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
GyrB_hook
HATPase_c
HATPase_c_3
Allatotropin-like_C
DUF6865
Motif
Other DBs
NCBI-ProteinID:
CAG77334
UniProt:
Q6CYR7
LinkDB
All DBs
Position
complement(4979023..4981440)
Genome browser
AA seq
805 aa
AA seq
DB search
MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGYCKDII
ITIHADNSVSVQDDGRGIPTGIHEEEGISAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSEKLKLVIHREGKLHEQTYKHGVAQAPLAVTGETDRTGTTVRFWPSHETFSNVL
EFEYEILAKRLRELSFLNSGVSIRLIDDREKDKADHYHYDGGIKAFVDYLNRNKTPIHPN
VFYFSTMKDDIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNTYMDK
EGYSKKSKISATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKTAVESLVNEKLVD
YLMENPSDAKIVVGKIIDAARAREAARKARDMTRRKGALDLAGLPGKLADCQERDPALSE
LYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIG
RDEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQLPEIVERGHVYIAQPPLYKVKK
GKQEQYIKDDEAMDQYQIMLALDGATLHTNAQAPALAGEPLEKLVSEHYAVQKLIGRMER
RFPRPLLNRLIYQPTLSEADLSEREKVQAWAESLISGLNANEVHGSTYSFVVHHDEERSV
FEPALRVRTHGVDTDYPLGAGFVAGGEYRKLNLLGEKLRGLIEEDAFIERGERRQPVASF
EQALEWLVKESRRGLTVQRYKGLGEMNPDQLWETTMDPTSRRMLRVTVKDAIAADELFTT
LMGDAVEPRRAFIEENALKAMNIDI
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaattcttatgactcctcaagtatcaaggtattgaaagggctggatgcggtacgt
aaacgcccaggtatgtatatcggcgatacggacgatggtaccggcctgcatcacatggta
tttgaggttgtggacaacgctatcgacgaagcactcgctggctattgtaaagacattatc
atcactatccatgccgataactcggtatcggtgcaggatgatggccgtggtattccaacc
ggcattcatgaagaagaagggatctctgcggctgaagtcatcatgactgtgctgcatgcg
ggcggtaagttcgacgataactcgtataaagtctccggcggcctgcacggcgtaggggtt
tctgtggttaacgccctgtcggaaaaactgaagctggttatccaccgtgaagggaagctt
cacgagcagacctataagcacggcgtggcgcaggcaccgctggcggtcacgggtgaaacc
gacagaacgggtacgacggtgcgtttctggccgagccacgagacgttcagcaatgtgctg
gaattcgagtatgagatcctggccaagcgtctgcgtgagctatcgttcctgaactccggc
gtctctattcgcctgattgacgatcgtgagaaagataaagccgatcattaccattatgat
ggcggtatcaaggcattcgttgactacctgaaccgtaacaagacgccaatccacccgaac
gtgttttatttctcgacgatgaaagatgacatcggcgtggaagtggcgttgcagtggaac
gatggtttccaggaaaacatttactgctttaccaacaatattccgcagcgtgatggtggt
acacacttggccggtttccgtgccgcgatgacccgtacgctgaatacttacatggataaa
gaaggctacagtaagaaatccaaaatcagcgcgaccggtgatgatgcgcgcgaagggctg
attgctgtggtgtctgtgaaagtgccggatccgaagttctcctcgcagaccaaagacaag
ctggtttcttccgaagtgaaaaccgcggtcgaatcactggtgaacgaaaagctggtggat
tacctgatggagaacccgtcagacgccaaaatcgtggtcggtaaaattattgatgccgca
cgtgcccgtgaagcggcgcgtaaagcacgtgatatgacacgtcgtaaaggcgcgctcgat
ctggctggcctgccgggcaaactggcagactgtcaggaacgcgaccctgcgttgtctgaa
ctgtacctggtggaaggggactcagcgggcggctctgctaagcagggacgtaaccgtaag
aaccaggcgattctgccgctgaagggtaaaatcctgaacgttgagaaggctcgttttgac
aagatgctttcttcgcaggaagtggcgacgctgatcactgcgctgggctgcggcattggc
cgtgatgaatacaacccggacaaactgcgctatcacagcatcattatcatgaccgatgcc
gacgtcgatggttcgcacattcgtaccctgctgttgaccttcttctatcgtcaactgcct
gaaattgttgagcgtggccacgtttatatcgcgcagccgccgctgtacaaagtgaaaaag
ggcaagcaagaacagtacatcaaagatgacgaagcgatggatcagtaccagattatgcta
gcactggacggcgcgacgttacacaccaatgcacaggcaccagcactggcgggtgaaccg
ctcgagaaactggtttctgaacattacgccgtgcagaagctaattggccgtatggagcgt
cgcttcccgcgtccgttgctaaatcgtctgatctatcagcctacgctgtctgaagctgat
ttgagcgagcgcgaaaaagtgcaggcgtgggcggaatcgctgattagcggcctgaacgca
aacgaagtgcacggcagcacgtacagctttgtggttcaccatgatgaagagcgtagcgtg
tttgaaccggcactgcgcgtgcgtacgcacggtgtggataccgattatccgctgggcgcg
ggcttcgttgcgggtggcgaatatcgtaagttgaatctgctgggcgaaaaactgcgtggc
ttgattgaagaagatgcgttcatcgaacgtggtgaacgtcgtcagccagtggccagcttt
gaacaggcgctggaatggttggtgaaagagtcccgccgtggtcttactgtacagcgttat
aaaggtctgggtgaaatgaacccggatcagctgtgggaaaccacgatggatccaaccagc
cgccgcatgctgcgtgtgacagtgaaagacgccattgctgccgatgagctgttcactacc
ctgatgggtgatgcagttgaaccgcgtcgtgcgtttatcgaagagaacgccctgaaggcg
atgaacatcgatatctga
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