Ensifer canadensis: J3R84_03890
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Entry
J3R84_03890 CDS
T09166
Name
(GenBank) lytic transglycosylase domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
ecaa
Ensifer canadensis
Brite
KEGG Orthology (KO) [BR:
ecaa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ecaa01011
]
J3R84_03890
Enzymes [BR:
ecaa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
J3R84_03890
Peptidoglycan biosynthesis and degradation proteins [BR:
ecaa01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
J3R84_03890
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
TPR_4
TPR_16
Motif
Other DBs
NCBI-ProteinID:
UBI76302
LinkDB
All DBs
Position
complement(800694..802766)
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AA seq
690 aa
AA seq
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MRGSILLPVAAMIGTALLASSALSSEASNTVPVPGSKPAISDKVGRVSGKDITGAIPATV
SPIQGGLKVGLDALSDKDPTKAITVRNGMHEGTLDRHILTWAIAVSGQRGVPSYEIADAQ
RELQGWPGLKSLRAHSERALYRENPAAPDILAAFGQTQPETTEGTIILARALVAQGQSAT
AATRLRALWFKQGLDKDVETQILSEFSGLLTVADHRRRMTMLLYRNRVEQAERFSDLGKA
QSLYRAWAAVSRGSTNAPALISAIDASWHKDPAYLFIRIESLRKQDKYAEAAKLLATMPR
DQDALVNPGEWWTEQRIVSRGLLDKGDFRGAYRVAANHKATEATDIVDAEFHAGWFALRG
VEDPAAASQHFRRILDVSNRPLSASRAWYWLGRSAEAGGPGNAKDYFANAARFPGTFYGQ
LAAARLGHKALNVTYPAPSAEDRARFENREAVRAIARLEAAGHGWRADSIYRALAEELTS
PGELAILSARAEKTRNHQLSLQIGKTAFGRGIDVAALAFPVGVIPSTANIDGSGKALAYA
IARQESAFNPAAVSTANARGLLQLLPGTAKGVASRYGLAYSKERLTSDAGYNATLGAHYL
GEQINSFGGSYILTFIAYNAGPRRVPDWLSRYGDPRGKPIDEVVDWIERIPFQETRNYVQ
RVMENYQVYKVRLGQGADIVADLRMGRQLP
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggatcaattcttctgcctgtcgccgccatgatcggcacagcgcttctggcctcg
tcggccctctcctccgaagcctcgaacacagtgccggtaccgggcagcaaacccgcaatc
tccgacaaggtcgggcgcgtttcgggtaaggacatcaccggcgcgatcccggcgacggta
tcgcccattcagggcggcttgaaggtcggtctggatgcgctttccgacaaggatccgacc
aaggcgatcaccgttcgaaacggcatgcacgagggcacgctcgatcgtcatattctgact
tgggcaatcgccgtatcggggcaacgtggcgtcccctcctacgagatcgccgacgcccag
cgcgaactgcaggggtggccgggcctcaaatcgcttcgcgcccattccgagcgcgcactt
taccgcgagaacccggcagcccccgatattcttgccgcctttgggcagacgcagcccgaa
accacggaagggacgatcatccttgcccgcgcgctggtggcacaggggcagagtgcgacc
gcagcaacgcggctgcgcgcgctctggttcaagcaggggctcgacaaggatgtggaaacg
cagatcctgtcggaattttccggcctgctgacggttgccgaccacagacggcggatgacg
atgctgctttatcgcaaccgcgtcgagcaggccgaacgcttcagcgatctcggcaaggcg
cagtcgctctatcgcgcctgggccgccgtcagccgcggcagcaccaatgcccctgcgctg
atatcggcgatcgacgcctcatggcataaggacccggcctatctgttcatccgtatcgaa
agcctgcgtaagcaggacaaatatgcggaggccgccaagctgctggccacgatgcctagg
gatcaggacgcgttggtcaatcccggtgaatggtggaccgaacaacggatcgtcagccgc
ggcttgctggacaagggggattttcgcggcgcctaccgagttgccgcaaaccacaaggca
accgaggcgaccgatatcgtcgatgcagagtttcacgccggctggttcgcgctgcgcggc
gtggaagatccggccgcagcatcgcagcatttccgacggatccttgatgtttccaaccgg
ccgctttcggcgtcccgcgcttggtattggctcggccgatcggcggaagcgggcggaccg
ggcaatgccaaggactatttcgccaatgccgcccgctttccaggcaccttctacggtcaa
ctcgccgctgcgcggctcggccacaaggcactcaacgttacctatcccgccccttcagcg
gaagaccgtgcccgtttcgaaaaccgcgaggcggttcgcgccatcgcacggctggaagcg
gcaggtcacggctggcgtgccgacagcatctatcgggcacttgcggaagaactgacgagc
cccggcgaactggcgatcctttcggcacgcgccgaaaagacccgcaatcatcagctttca
ctccagatcggcaagaccgcctttggccgtggcatcgatgtcgctgcactcgcttttccc
gtcggcgtcatcccgtcgaccgccaacatcgatggctcgggcaaggcgctcgcctacgcg
atcgcgcgccaggaaagcgccttcaatcctgcggcggtctccacggccaacgcgcgcggc
ttgctgcaactgctgcccggcaccgccaaaggggtagccagccgctacggccttgcttac
tccaaggagcgcctgacgagcgatgccggatacaacgccaccctcggcgcgcattatctc
ggcgagcagatcaacagcttcggtggttcctatattctcaccttcattgcctacaatgcc
ggcccgcgtcgcgtaccggactggctcagccgctatggcgacccgcgcggcaaaccgatc
gacgaggtcgtcgactggattgagcgcatcccgttccaggaaacgcgcaactacgtccag
cgcgtgatggaaaactatcaggtctacaaggtcaggctcggtcaaggcgctgacatagtc
gccgaccttagaatgggacgacagttaccttag
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