Ensifer canadensis: J3R84_05100
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Entry
J3R84_05100 CDS
T09166
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ecaa
Ensifer canadensis
Pathway
ecaa03030
DNA replication
ecaa03430
Mismatch repair
ecaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J3R84_05100 (dnaE)
03430 Mismatch repair
J3R84_05100 (dnaE)
03440 Homologous recombination
J3R84_05100 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecaa03032
]
J3R84_05100 (dnaE)
03400 DNA repair and recombination proteins [BR:
ecaa03400
]
J3R84_05100 (dnaE)
Enzymes [BR:
ecaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J3R84_05100 (dnaE)
DNA replication proteins [BR:
ecaa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J3R84_05100 (dnaE)
DNA repair and recombination proteins [BR:
ecaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J3R84_05100 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
UBI76519
LinkDB
All DBs
Position
1051044..1054541
Genome browser
AA seq
1165 aa
AA seq
DB search
MADHGSGERNDQTTADPQFVHLRVHSAFSLLEGALPLKKVIGKAVADAQPAIGIADTNNL
FAALEFSQKAAEDGLQPLTGCQLSIDMEDDGDGERRSHAQQLAKLPAIVLIAATDDGYTR
LVDLVSRAYLGGEGSQVTRITRSWLVEAGTDGLIALSGAGGGPIDMAVKSGSTALAEARL
EALKDLFGDRLYIELQRHGNFDRRHESRMIDLAYKFDVPLVATNEAFFPSPSDYDAHDAL
MAVAHNAMVSDDSRFRLTPDHYLKSRKEMAALFADLPEALENTIEIARRCSFMLKTRGPI
LPRFTGASDDPEEAERAESSELRRQAEEGLDDRLRKLGMAPGYTEEEYRERLAFELSVIE
RMKFPGYFLIVADFIKWAKQQDIPVGPGRGSGAGSLVAYALTITDVDPMRFSLLFERFLN
PERVSMPDFDIDFCQDRREEVIRYVQAKYGREQVAQIITFGSLQARAALRDVGRVLEMPY
GQVDKICKLVPNNPANPTPLSKAIEEEPRLQEEAEKEPVVARLLDIAQKIEGLYRHASTH
AAGIVIGDRPLSKLVPMYRDPRSDMPVTQFNMKWVEQAGLVKFDFLGLKTLTVLKVAVDF
VKLRGIEVDLASIPLDDEKTYEMLSRGETVGVFQVESAGMRKALIGMRPDCIEDIIALVA
LYRPGPMENIPVYNARKHGEEEIESIHPKIDHLLKETQGVIVYQEQVMQIAQVLSGYSLG
EADLLRRAMGKKIKEEMDKQRARFVDGAVKNEVSKPQADLIFDLLAKFANYGFNKSHAAA
YAIVSYQTAYMKAHYPVEFLAASMTLDMANTEKVNDFRQDAGRLGIQVIAPSVQSSFRHF
QTGDKRIYYSLAAIKGVGESAVEHIVAVRGDREFASLEDFCLRIDPKLLNRRVFESLIAA
GAFDCFGYDRAELVGGLDRILGFAQRAQENKTSGQSDMFGAGAATGPERISLPTYTPWLA
SEKLHREFQVLGFYLSAHPLDTYNPLLAKMRVQTFGDFAGAVKKGATAGRLAGTVTSRQE
RKTRTGNKMGIIAFSDSSGQFEAVLFSEMLHQYRDLLEPGKSLVMTVQAEERPEGIGLRI
QTLRSLEEESLQMQKALRVYVRDSGPLKSIAAHLNARGEGLVSFIVIKDNGQREIEVELN
EKFRISPEIAAALRSAPGVVDVELV
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcacggcagcggggaacggaacgatcagacgactgcggatccgcagttcgtg
catttgcgtgttcactcggctttttcgctgctcgaaggcgcactgcctttgaagaaggtg
atcggcaaggctgtggccgatgctcagccggcgatcggtatcgccgacaccaacaatctt
ttcgcagcccttgaattttcccagaaggcggccgaggacggcctgcagccgctgaccggc
tgtcagttgtcgatcgacatggaagacgacggtgacggcgaacgtcgcagccatgcccag
cagctcgccaagctgccggccatcgtcctgatcgccgcgacggacgacggctacacacga
ctggtcgatctggtaagccgcgcctatctcggcggcgaaggcagccaggtcacgaggatc
acgcggtcgtggctcgtggaggccggcaccgacgggctgatcgccctttcgggcgcaggc
ggcggcccgatcgacatggcggtgaaatccggctcgacggccttggccgaggcacgcctg
gaagccctaaaggatctcttcggcgatcggctctatatcgagctgcaacggcacggaaac
tttgaccgccgacatgaaagccggatgatcgatctggcgtacaagttcgatgtgcctctg
gttgcgaccaacgaggcgttctttccctcgccatccgactatgacgcgcacgacgcgctg
atggcggtcgctcacaacgccatggtttccgacgacagtcggttccggttgacgccggat
cattatctcaagagccggaaggaaatggcggcactttttgccgacctgcccgaggcgctc
gaaaataccatcgagatcgcgcggcgctgctcgttcatgctgaagacgcgcgggccgatc
ctgccacgcttcaccggcgcctcggacgatccggaggaggccgagcgtgccgagtccagc
gagttgcgccggcaggcggaagaggggctcgacgatcggttgcgcaagctcggcatggcg
cccggctatacagaggaagagtaccgcgagcggttggcgttcgaactcagcgtcatcgag
cgcatgaagttccccggctacttcctgatcgttgccgacttcatcaaatgggccaagcag
caggacatccccgtcggcccgggacgcggttcgggcgcgggctcgctcgtcgcctatgcg
ctgacgatcaccgatgtcgacccgatgcggttctcactgctgttcgaacgcttcctcaat
ccggaacgcgtatcgatgcccgacttcgacatcgacttctgtcaggaccggcgcgaagaa
gtcattcgctacgtccaggcgaaatacggccgcgagcaggtggcccagatcatcaccttc
ggttcgcttcaggcgcgcgcggcgctgcgcgacgtcggccgcgtgctcgagatgccctat
ggccaggtcgacaagatctgcaagctcgtgcccaacaatccggccaacccgacgccgctg
tcaaaggcgatcgaggaagaaccgcgcctgcaggaagaggcggaaaaggaacccgtcgtc
gcccgtcttctcgacatcgcgcagaagatcgagggtctctatcgccatgcctcgacccac
gcagccggtatcgtgatcggcgaccggccgctgtcaaagctcgtgccgatgtatcgcgat
ccgcgttccgatatgccggtgacgcagttcaacatgaaatgggtcgagcaggccggcctg
gtaaaattcgacttcctcggcctgaaaacgctgaccgtgctgaaggtcgccgtcgacttc
gtcaagctgcgcggcatcgaggtcgatctcgccagcattccgctcgacgacgagaagacc
tacgagatgctgtcgcgcggcgagacggtcggcgtgttccaggtggaaagtgccggcatg
cgcaaggcgctgatcggtatgcggccagactgcatcgaggacattattgcgctggtggcg
ctttatcgtccgggcccgatggagaatatcccggtctacaacgcccgcaagcacggcgaa
gaagagatcgaatcgatccatccgaagatcgaccatctgctcaaggaaacgcagggcgtt
atcgtctaccaggagcaggtgatgcagatcgcccaggtcctgtcgggctattcgctcggc
gaagccgaccttctgcgtcgcgccatgggcaagaagatcaaggaggaaatggacaagcag
cgcgcccgtttcgtcgacggcgcggtcaagaacgaggtatcgaagccgcaggccgatctg
atcttcgatcttctcgccaagttcgccaactacggcttcaacaagtcgcacgctgccgcc
tacgccatcgtctcctatcagacggcctatatgaaggcgcactatccggtcgagttcctg
gcggcgtcgatgacgctcgatatggccaacacggagaaggtcaacgacttccgtcaggat
gccgggcgcctcggcatccaggtgattgcgccgtcggtccagtcctccttccggcatttc
cagaccggcgacaagcgcatctactactcattggccgccatcaagggtgtcggcgaatcg
gcagtcgagcatatcgttgccgttcgcggcgaccgcgagtttgcgagccttgaggatttc
tgcctgaggatcgacccgaagctgctcaaccggcgtgtgttcgaaagcctgatcgcggcc
ggcgccttcgattgcttcggttacgaccgtgccgagctggtcggcggtctcgatcgcatc
ctcggctttgcccagcgcgcgcaggaaaacaagacgagcggacagagcgatatgttcggt
gcgggggccgcgaccggaccggaacggatctcgcttcccacctacacgccgtggctcgcc
tcagaaaagctgcaccgcgagtttcaggtgctgggcttctatctctcggcccatccgctc
gacacctacaacccgctgctcgccaagatgcgcgtccagaccttcggcgatttcgccgga
gcggtgaagaagggcgcaacggcgggacgtctcgccggcaccgttacctccagacaggag
cgcaagacccgaaccggcaacaagatgggcatcatcgctttctcggattcgtccggtcag
ttcgaggccgtgctgttttcggaaatgctgcaccagtatcgcgacctgcttgagcccggc
aaatcgctggtgatgacggttcaggcggaggagcggccggaaggcatcggccttcgcatc
cagaccctgcgctcgctcgaggaagaatcgctgcagatgcagaaggcgctgcgcgtttat
gtgcgcgattcaggaccactgaagtcgatcgccgcccatttgaatgcgaggggcgagggt
ctcgtttccttcatcgtcatcaaggataacggccagcgcgagatcgaggtcgaactcaac
gagaagttcaggatttcgccggagattgccgcagcacttcgctcggctccgggtgtggtc
gacgttgaactcgtctga
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integrated database retrieval system
