Ensifer canadensis: J3R84_05565
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Entry
J3R84_05565 CDS
T09166
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ecaa
Ensifer canadensis
Pathway
ecaa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ecaa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
J3R84_05565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecaa03021
]
J3R84_05565
03400 DNA repair and recombination proteins [BR:
ecaa03400
]
J3R84_05565
Enzymes [BR:
ecaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
J3R84_05565
Transcription machinery [BR:
ecaa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
J3R84_05565
DNA repair and recombination proteins [BR:
ecaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
J3R84_05565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
IDH
Motif
Other DBs
NCBI-ProteinID:
UBI76603
LinkDB
All DBs
Position
1138765..1139775
Genome browser
AA seq
336 aa
AA seq
DB search
MIQKNWQELIKPNKVEFISSGRTKATLVAEPLERGFGLTLGNALRRVLLSSLRGGAVTAV
QIDGVLHEFSSIPGVREDVTDIVLNIKEIAIKMDGDDAKRMVVRKQGPGVVTAGDIQTVG
DIEILNPNHVICTLDEGAEIRMEFTVNNGKGYVPADRNRSEDAPIGLIPVDSLYSPVKKV
SYKVENTREGQVLDYDKLTMSIETDGSVTGEDAIAFAARILQDQLSVFVNFDEPQKEAEE
EAVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLN
EIKEVLASMGLHLGMEVPSWPPENIEDLAKRYEDQY
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgatccagaaaaattggcaggaactgatcaagccgaacaaggtggagttcatctcctcg
ggccgcaccaaggcaacgttggtcgcggaaccgcttgaacgcggctttggtctgacgctc
ggcaacgcgcttcgccgcgtgctgctgtcgtcgcttcgcggtggtgctgttaccgcggtg
cagatcgacggcgtcctgcacgagttctcctctatcccgggcgttcgggaagacgtgacg
gacatcgtgctcaacatcaaggaaatcgccatcaagatggatggcgacgacgcaaagcgc
atggttgtgcgcaagcagggtccgggcgttgtaaccgccggtgacatccagacggttggc
gacatcgaaatcctcaacccgaaccatgtgatctgcaccctcgacgagggcgctgaaatc
cgcatggagttcaccgtcaacaacggcaagggctacgttccggctgaccgtaaccgttcg
gaagatgctccgatcggcctcatcccggtcgacagcctgtactcgccggtcaagaaggtc
tcgtacaaggtggaaaacacccgcgaaggccaggttcttgattatgacaagctgacgatg
tccatcgagacggacggctccgtcaccggtgaagatgcgatcgcgtttgcggcccgcatc
cttcaggaccagctgtcggttttcgtcaacttcgacgagccgcagaaggaagcagaggaa
gaggcagtcaccgagctcgccttcaacccggcgcttctcaagaaggtcgacgaactggaa
ctttccgtccgttcggccaactgcctgaagaacgacaacatcgtctacatcggcgacctc
attcagaagaccgaagcagaaatgctccgcacgccgaattttggtcgcaagtcgctgaac
gaaatcaaggaagttctcgcttccatgggcctgcacctcggcatggaagtgccgtcctgg
ccgcctgagaacatcgaagatctcgccaagcgttacgaagaccaatactaa
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