Ensifer canadensis: J3R84_12265
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Entry
J3R84_12265 CDS
T09166
Name
(GenBank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ecaa
Ensifer canadensis
Pathway
ecaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J3R84_12265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecaa03019
]
J3R84_12265
Enzymes [BR:
ecaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
J3R84_12265
Messenger RNA biogenesis [BR:
ecaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
J3R84_12265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
tRNA_NucTran2_2
Sugarporin_N
DUF348
Motif
Other DBs
NCBI-ProteinID:
UBI74275
LinkDB
All DBs
Position
complement(2517960..2519219)
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AA seq
419 aa
AA seq
DB search
MTSVAGESWFSAPSLRRVFDLLNVEGGEVRVVGGAVRNSLMGVPAGDVDMATTWHPDEVV
ARAKAADIKVVPTGIDHGTVTLVIDGTPYEVTTLRRDVATDGRRAEVAFGTDWKVDAERR
DFTINALYADHEGEVVDDVGGLADIKTRTLRFIGNAAERVAEDYLRILRFFRFFAHYGNG
RPDADGLRACAQARSKLSTLSAERVWAETKKLLSAEDPGRALLWMRQAGVLTEILPETEK
WGIDAIPELVAAEKAFSWAPDPLLRLAAIVPPDEDRLEAMAARLRLSKAEAAYFSRFANA
PALPAKTVDAALDRLLYRHGAEGISVRLRLALASARRKSENDPALLAETAAFQRLLTRTE
AWKRPSFPLTGADVLKAGIPAGPRVGQILGELEALWVDRNFSVDRANLVARLETMVPRA
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgacctcggttgccggtgagagctggttttcggctccatcccttcgtcgcgtcttcgat
ctcctgaatgtcgagggcggggaggtgcgcgtcgtcggcggcgccgtgcgcaacagcctg
atgggggtgccggccggcgatgtcgacatggccaccacctggcatccagacgaggtcgtt
gcccgcgccaaggcagccgacatcaaggtggtaccgacaggcatcgaccacggcacggtg
acgctcgtcatcgacggtacgccctatgaggtgacgacgctgcgccgcgatgtcgcgacc
gacgggcgccgcgctgaagttgcgttcggaaccgactggaaggtggatgccgagcggcgc
gacttcaccatcaacgcgctctacgcggaccatgagggcgaggtcgtggacgacgtcggc
ggccttgccgatattaagacccgcactttgcgcttcatcggcaatgctgccgagcgggtg
gccgaggattatcttcgcatcctgcgcttcttccgcttcttcgcccattacggcaacggt
cgccccgatgccgatggcctgagggcctgcgcccaggcgcgttccaagctgtcgacactt
tcggcagagcgggtttgggccgagacgaagaagctgctttcagccgaggacccgggccgg
gcgctgctctggatgcgccaggcgggcgtgttgaccgaaatcctgcccgagaccgagaaa
tggggcatcgacgccattccggaactggttgctgccgagaaggccttttcttgggcaccg
gatccactgctgcgccttgcggcaatcgtgccgccggatgaagatcggctcgaagccatg
gccgcgcggctgcgcctgtcgaaggccgaggcagcgtatttttcgcgctttgcgaatgcg
ccagcgctaccggcaaagactgtggatgcggcgctcgatcgcttgctctaccgccacggc
gctgaggggatttccgtccggcttcgcctcgcgctcgcctcggccagacgcaagtccgaa
aacgatccggccttgcttgccgagacggcggcgttccagcgcctcttgacgcgcaccgag
gcatggaagcgcccgagcttcccgctgacgggcgccgatgtgctgaaggccggcatcccc
gccgggcctcgcgtcggccagatcctcggtgagctggaggccctgtgggtagaccgcaat
ttcagtgtcgaccgggcaaaccttgtcgcccgcctcgagacgatggtgccgcgcgcgtaa
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