Ensifer canadensis: J3R84_17650
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Entry
J3R84_17650 CDS
T09166
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ecaa
Ensifer canadensis
Pathway
ecaa03030
DNA replication
ecaa03430
Mismatch repair
ecaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J3R84_17650 (holA)
03430 Mismatch repair
J3R84_17650 (holA)
03440 Homologous recombination
J3R84_17650 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecaa03032
]
J3R84_17650 (holA)
03400 DNA repair and recombination proteins [BR:
ecaa03400
]
J3R84_17650 (holA)
Enzymes [BR:
ecaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J3R84_17650 (holA)
DNA replication proteins [BR:
ecaa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J3R84_17650 (holA)
DNA repair and recombination proteins [BR:
ecaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J3R84_17650 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
UBI75244
LinkDB
All DBs
Position
3658273..3659307
Genome browser
AA seq
344 aa
AA seq
DB search
MSEVKSHEFDSFLQKSAALYRLFVLYGPDRGLVSERAEAIASRSGVALDDPFSITKLDAG
DLQQSPGRLLDEVNSIGLFGGERLIWVRGAANEKALVDGLQILAGEPPTGSYVVVEAGDL
KKGSALRKVAETARSIATIACYSDDARSLQALIDKELGEEKLGITPAARERLMEALGGDR
LASRNEVRKLALYCRGKSTVDESDVTDIVGDASAISVDDAVDAVLKGDLDGLLHAMQKIT
TSKTPAFLVLQGCLRQFQQLDLMRAEMDASRQQAGQVIATMGRHLHFRRKPIIEAALRHW
SSPAIRRELTRLQNTIYQSRTRQSLEESMVLQNLLAIAVQSARR
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagtcaagtcgcacgaattcgactctttcctacagaagtcagcggcactttat
cgcctctttgtcctctacggaccagaccgcgggctggtttcggagcgggcagaggcgatc
gcgtcgcgcagcggcgttgcgctcgacgacccattttccatcaccaagctcgatgccggg
gatctgcaacagagccccggccggttgctcgacgaggtcaattcgatcggcctcttcggt
ggcgaaaggctcatctgggtccgcggagccgccaacgagaaggcgttggtcgatggtctg
cagattttggccggcgaaccgccgaccggtagctatgttgtcgtcgaagcgggtgatctc
aagaagggatcggcgctgcgcaaggtggccgagacggcacgttcgatcgcgactatcgcc
tgctacagcgacgacgcccgcagcctgcaggcgttgatcgacaaggaattgggcgaagaa
aaactcggcattactccggcggcacgtgaacggctgatggaagcgcttggcggcgaccgc
ctggcatcgcgcaacgaagtacgcaagcttgcactctattgccgtggcaagagcaccgtc
gacgaatcggatgtgaccgacattgtcggcgatgccagcgccatttccgttgatgatgct
gtcgatgcggtcctgaagggtgaccttgacggtctattgcatgcgatgcagaagataacc
acgtcaaaaacgcccgccttcctcgttttgcaggggtgcctcaggcagtttcagcagctc
gatctgatgcgcgccgaaatggatgccagccgccagcaggccggccaggttatcgccacc
atgggccggcacctgcattttcgtcgcaagcccatcatcgaagcagccctcagacattgg
tcttcgccggcgatccgccgcgaactgacacggcttcaaaatacgatctatcagagccgc
acgcgccagagcctcgaggagagcatggtgctgcagaacctgttggcgattgccgtgcag
tcagccagacgctga
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