KEGG   Ensifer canadensis: J3R84_17680
Entry
J3R84_17680       CDS       T09166                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
ecaa  Ensifer canadensis
Pathway
ecaa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ecaa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    J3R84_17680 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ecaa03021]
    J3R84_17680 (rho)
   03019 Messenger RNA biogenesis [BR:ecaa03019]
    J3R84_17680 (rho)
Transcription machinery [BR:ecaa03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     J3R84_17680 (rho)
Messenger RNA biogenesis [BR:ecaa03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     J3R84_17680 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_22 OB_RNB AAA_25 S1CSD-TOTE-2 NACHT DUF6360 AAA Fungal_virus_P2_C
Other DBs
NCBI-ProteinID: UBI75250
LinkDB
Position
complement(3665541..3666806)
AA seq 421 aa
MAEMKLQELKNKTPTDLLAFAEELEVENASTMRKQELMFAILKMLASQDIEIIGEGVVEV
LQDGFGFLRSANANYLPGPDDIYISPSQIRRFSLKTGDTVEGPIRGPKEGERYFALLKVN
TINFDDPEKIRHKVHFDNLTPLYPNERFKMELDIPTSKDLSARVIDLVAPLGKGQRGLIV
APPRTGKTVLLQNIAHSITANHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPAT
RHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPA
MDILKSGTRKEDLLVPRQDLQKIFVLRRILAPMGTTDAIEFLIDKLKQTKNNGDFFDSMN
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggctgaaatgaagctacaagaacttaagaacaagacgccgaccgatcttctggccttt
gccgaagagctcgaggtggaaaatgcgagcaccatgcgcaagcaggagctgatgttcgca
atcctcaagatgctcgcctcccaggatatcgaaatcatcggtgaaggcgtcgtcgaggtt
ctgcaggacggattcggctttctgcgctctgccaatgccaactaccttcccggcccggac
gatatctacatctccccctcccagatccgccgcttctcgctgaagaccggcgacacggtc
gagggaccgatccgcggaccgaaggaaggcgaacgctacttcgcgctgctgaaagtcaac
accatcaatttcgacgatcccgaaaagatccgtcacaaggttcacttcgacaacctgacg
ccgctctatccaaacgagcgcttcaagatggaactcgatatcccgacgtcgaaggacctt
tctgctcgggtgatcgacctggtcgcgccgctcggcaagggccagcgcggtctgatcgtc
gctccgccgcgcaccggtaagaccgttctcctgcagaacatcgcccactcgatcaccgca
aaccatccggaatgttacctgatcgttctgttgatcgacgaacggccggaagaagtcacc
gacatgcagcgctccgtgaagggcgaagtggtttcctctacctttgacgagccggcgacg
cgccacgtgcaagtcgccgaaatggtgatcgaaaaggcaaagcgcctggtcgagcacggc
cgcgacgtcgtgatcctgctcgattccatcacccgcctcggtcgcgcctataacaccgtt
gttccttcatccggcaaggttctgaccggtggtgtcgacgccaacgccctgcagcgcccg
aagcgcttctttggtgccgcccgcaacatcgaagaaggtggttcgctgaccatcatcgcc
acggcgctgatcgataccggcagccgcatggacgaagtcatcttcgaagagttcaagggt
accggcaactcggaaatcgtgctcgaccgcaaggtcgccgacaagcgcatcttcccggcg
atggacattctcaagtccggcacgcgtaaggaagacctgctggttccacgccaagatctg
cagaagatcttcgttcttcgccggattctggccccgatgggtaccaccgacgcgatcgag
ttcctcatcgacaagctgaagcagacaaagaacaacggcgacttcttcgactcgatgaac
acctga

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