Ensifer canadensis: J3R84_18690
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Entry
J3R84_18690 CDS
T09166
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ecaa
Ensifer canadensis
Brite
KEGG Orthology (KO) [BR:
ecaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecaa03016
]
J3R84_18690 (truB)
Enzymes [BR:
ecaa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
J3R84_18690 (truB)
Transfer RNA biogenesis [BR:
ecaa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
J3R84_18690 (truB)
Prokaryotic type
J3R84_18690 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
UBI75434
LinkDB
All DBs
Position
3881143..3882078
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AA seq
311 aa
AA seq
DB search
MSKPRKPKGRPISGWLILDKPLDFGSTEAVSKIKWLFKAQKAGHAGTLDPLASGMLPIAL
GDATKTVPYVMDGRKIYEFTVAWGEERSTDDLEGQVTHSSDARPTEEAIRALLPNYTGVI
SQVPPQFSAIKIDGERAYDLARDGETVDIPAREVEVFRLTLLGAAPNLAQFEIECGKGTY
VRSIARDMGRDLGCFGHIASLRRTFVAPFGEDDMVPLADLVALEKIEDEDERLAALDAFV
IETGEALSSLPHIAVSDDQAHRLKMGNPIILRGRDAPLATPEAYATTRGKLIAIGEIAEG
EFRPKRVFAVG
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaccgcgtaaacccaagggccgtccgatctcgggctggctgatcctcgacaag
ccgctcgatttcggctcgaccgaagccgtttccaagatcaagtggctgttcaaggcgcag
aaggccggccatgccggcacgctcgatccactggcgtccggcatgctgccgatcgctctt
ggcgacgcgaccaagaccgtcccctatgtcatggatggccgcaagatctatgaatttacg
gtcgcctggggcgaagagcgctcgaccgacgatctcgaaggccaggtgacgcattcttcg
gacgcacgcccgaccgaagaggcgatccgcgccctcttgccgaactataccggcgttatc
agccaggtgccgccgcagttctctgcgatcaagatcgacggcgagcgcgcctacgatctc
gcccgcgatggcgagaccgtcgatatcccggcacgcgaagtcgaggtgttccgcctgacg
ctgctcggcgccgcgcccaatctcgcccagttcgagatcgaatgcggcaagggcacttat
gttcgctcgatcgcccgcgacatgggccgcgatctaggctgtttcggccacatcgcttcg
ctgcggcgcaccttcgtcgcgccgttcggcgaggatgacatggtgccgctcgccgatctg
gtggcactcgaaaagatcgaagacgaggacgagcggctggcagccctcgatgcgttcgtc
atcgaaaccggcgaggcgctgtccagcctgccgcatatcgccgtcagcgacgaccaggcg
catcggctgaagatgggcaatcctatcatcctgcgtggccgagacgcgcctctggcaacg
ccagaagcctatgcgaccacccgcggcaagctgatcgccatcggtgagatcgccgaaggc
gagttccgcccgaagcgggtctttgccgtcggctga
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