Ensifer canadensis: J3R84_19760
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Entry
J3R84_19760 CDS
T09166
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ecaa
Ensifer canadensis
Brite
KEGG Orthology (KO) [BR:
ecaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecaa03032
]
J3R84_19760
03400 DNA repair and recombination proteins [BR:
ecaa03400
]
J3R84_19760
Enzymes [BR:
ecaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
J3R84_19760
DNA replication proteins [BR:
ecaa03032
]
Prokaryotic type
DNA Topoisomerases
J3R84_19760
DNA repair and recombination proteins [BR:
ecaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
J3R84_19760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
UBI79166
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Position
pT173e:complement(31865..32881)
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AA seq
338 aa
AA seq
DB search
MEPDLIYVTDADPGIRRYRKGKRFSYRLPDGSTLKDPDTRARIAALGLPPAYERVWICSK
QNGHLQATGFDARGRKQYRYHDAWQEMRNHAKFDQLIDFATALPKIRRTLRRHMDGPLDD
ARTVLAALSTLLDQASLRVGNATYVEENGTYGATTLLKRHLKLRDEGIELRFMGKGGKRV
VRRLRSPRLQRLLEDIADLPGRQLFVSRDANGDLHPIDSGRLNRYLADISGAPISAKTFR
TWAGSVAAFAEARLTLAEGRRPSVKRMCEAAADVLHNTPAVCRKSYVHPDIIALADSESK
INLRRLEALPRQSSLLRAEEDRLLRFLQYAARAKRRAT
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggaacccgacctcatctacgtgaccgacgccgatccgggcataaggcgctaccggaag
ggaaagcgcttcagctatcgccttccggacggctcgaccctcaaggatccggacacccga
gcgcgtattgcagcgctcggcctgccacccgcctatgagcgtgtctggatctgttccaag
cagaacggccacctgcaggcgaccggcttcgatgcgcgcgggcgaaagcagtaccgctac
catgatgcctggcaggaaatgcgcaatcacgccaagttcgatcagttgatcgacttcgcc
actgccctgccgaaaattcgccggacccttcgccgccatatggatgggccgcttgacgat
gctcgcaccgtgctcgccgccctttcgacactgctcgatcaggcgagcctgcgcgtcggc
aacgccacctatgtcgaggaaaacggcacctatggcgcaacgacgcttttgaaacggcat
ctcaagctgcgcgatgagggcatcgagcttcgcttcatgggcaagggcggcaagcgtgtc
gttcgccggctgcgtagtccgcggctgcaacggttgctcgaagatattgccgacctgccc
ggacgccagcttttcgtcagcagggacgcgaacggtgatctgcatccgatcgattccggt
cggctcaatcgctatctcgccgacatctccggtgcaccgatctcggccaagacatttcgc
acctgggcgggaagcgtcgccgcttttgccgaggcgcggctgacgctggcggaggggcgg
cgcccctcggtcaagcggatgtgcgaggcagcagccgacgtgttgcacaacaccccggct
gtctgccgcaagagctatgttcacccagatatcatcgcccttgccgacagcgagagcaaa
attaacctgcggcggcttgaggcgctgccaaggcaaagcagcctgttgcgtgccgaggag
gatcgcctgctgcggttcctccaatacgccgcgcgcgcgaagaggcgtgcgacctga
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