Ensifer canadensis: J3R84_21550
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Entry
J3R84_21550 CDS
T09166
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ecaa
Ensifer canadensis
Pathway
ecaa03030
DNA replication
ecaa03430
Mismatch repair
ecaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J3R84_21550
03430 Mismatch repair
J3R84_21550
03440 Homologous recombination
J3R84_21550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecaa03032
]
J3R84_21550
03400 DNA repair and recombination proteins [BR:
ecaa03400
]
J3R84_21550
Enzymes [BR:
ecaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J3R84_21550
DNA replication proteins [BR:
ecaa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J3R84_21550
DNA repair and recombination proteins [BR:
ecaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J3R84_21550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
SLBB
Motif
Other DBs
NCBI-ProteinID:
UBI78724
LinkDB
All DBs
Position
pT173e:420908..421879
Genome browser
AA seq
323 aa
AA seq
DB search
MALQYDMFVSSDPDEKGARSKRASSRAAAGMSAGAMVDHLEATGRYRVLQKLEPRPVVAA
PRAEFPLVGVILDTETTGLNHRKDEIIEIGVIAFTFDAHGAIGDVIDVYGGLRQPSGSIP
AEITRITGITDEMVAGETIDVARLQAIIERADLIIAHNAGFDRPFCEAFSPIFEKKAWAC
SVSEIGWSDRGFEGTKLGYLIGQAGYFHDGHRAVDDCFALLEVIAGPADDTQETPFAELY
AASQRSRVRLYAENSPFEMKDHLKGRGYRWSDGSDGRPKSWWIEIGEEGLDEELRYLRTE
IYRWNEADPPMVRLTAFDRFKVR
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcattgcaatacgacatgtttgtttcgtccgatccggacgagaagggcgcacgctcc
aagcgcgcgtcctcacgcgcggctgccggcatgagcgccggcgccatggtcgatcatctg
gaggcgacgggtcgctaccgcgttctgcaaaagctggagccgcgccccgtcgtggccgcg
ccgcgcgccgagtttccgctcgtcggcgtcatcctcgacaccgagaccaccggcctcaac
catcgcaaggacgagatcatcgagatcggcgtcattgcgttcacctttgacgctcacggg
gccatcggcgacgtgatcgacgtctatggcggtctgcggcagccgagcggctccattcca
gccgagatcacgcgcatcaccggcattaccgacgaaatggtcgccggcgaaaccatcgat
gttgcccggcttcaggcgatcattgagcgcgccgatctgatcatcgcccacaatgccggg
ttcgaccggccgttttgcgaagctttttcgccgatcttcgagaagaaggcctgggcctgc
tcggtctccgagatcggctggagcgaccgcggcttcgagggcacgaagctcggctacctc
atcggccaggcgggatatttccacgacggccaccgcgccgtcgacgattgttttgccctg
ctcgaggtgattgcgggcccagccgatgatacgcaagagacaccttttgccgagctctac
gcggcaagccagcgatcacgcgttcgcctctatgcggaaaacagccccttcgaaatgaag
gaccacctgaagggccgcggctatcgctggtccgacggcagcgatgggcgcccaaaatcc
tggtggatcgagatcggcgaagaggggctggacgaggagctgcgctacctcagaaccgaa
atctatcgctggaacgaggccgatccgccgatggtgcggctgacagccttcgaccgcttc
aaggtgcgctga
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