Ensifer canadensis: J3R84_21560
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Entry
J3R84_21560 CDS
T09166
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ecaa
Ensifer canadensis
Pathway
ecaa03420
Nucleotide excision repair
ecaa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ecaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J3R84_21560
03430 Mismatch repair
J3R84_21560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecaa03400
]
J3R84_21560
Enzymes [BR:
ecaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J3R84_21560
DNA repair and recombination proteins [BR:
ecaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J3R84_21560
MMR (mismatch excision repair)
Other MMR factors
J3R84_21560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
AAA_30
Viral_helicase1
HHH_5
HHH
AAA_12
Motif
Other DBs
NCBI-ProteinID:
UBI78726
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All DBs
Position
pT173e:complement(423277..425343)
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AA seq
688 aa
AA seq
DB search
MAAAYLEKLNDRQRDAVEFGVTAPGETIAGPLLIIAGAGSGKTNTLAHRVAHLIVNGADP
RRILLMTFSRRAASEMARRVERICAQVLGANATVATDALTWAGTFHGIGARLLRIYAEQI
GLNVDFTIHDREDSADLMNLVRHELGLSKTESRFPTKGTCLSIYSRAVNSETPLSEVLRA
HYPWVSGWEEQLKQLFSCYVEAKQTQNVLDYDDLLLYWAQTVSVPELAEDIGNRFDHVLV
DEYQDTNRLQSSVLMALKPGGRGLTVVGDDAQSIYSFRAATVRNILDFPGEFTPPADVIT
LDRNYRSTQTILAAANGVIDLARERFTKNLWTERQSAERPKLLAVADEADQARYIVEKVL
ENREIGMTLKQQAVLFRSSNHSGPLEVELTRRNIPFVKFGGLKFLDSAHVKDMLAVLRFA
QNPRDRVAGFRLLHMIPGVGPQTAGKILDAIAADPEPLAALGEIPAPPRSGDNWRDFVTL
IEGLRKQAGGWPGEIAQAREWYEPHLDRIHEDADTRKADLLQLEQIAGGYPSRERFLTEL
TLDPPDATSDQAGVPLLDEDYLILSTIHSAKGQEWRSVFMLNVVDGCIPSDLGVGTTHEI
EEERRLLYVGMTRAKDSLTLITPQRFFTSGQHAQGDRHVYASRTRFIPATLLQFFETASW
PVVSASASERSARQIRIDVGARMRTMWK
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
gtggcggcggcctatctggaaaaattgaatgatcgacagcgcgatgccgtcgaatttggc
gtaaccgcacccggcgaaacgattgcagggccactcctgatcatcgccggcgccgggtcg
ggcaaaacgaatacgctcgcccatcgtgttgcccacctcatcgtcaatggcgccgacccc
cgccgcatcctgctgatgacgttttcgcgccgtgcggcctccgaaatggcgcgacgggtc
gagcgcatctgcgcccaggtgcttggggcaaacgccactgttgccaccgatgcgctcacc
tgggccggaacattccacggcatcggcgcgcgcctgctgcgcatctatgccgagcaaatc
ggcttgaatgtcgatttcacgatccatgaccgggaagacagtgccgacctgatgaacctt
gtccggcatgagctcggcctctcgaagaccgagagccgcttcccgaccaagggcacctgc
ctgtcgatctactcgcgggcggtcaactccgagacgccgctgagcgaggtcttgcgcgcg
cactatccctgggtttccggttgggaggagcagttgaagcagctgttttcctgttatgtc
gaggcaaagcagacgcagaacgtgctcgattacgacgacctgctgctctactgggcgcag
accgtcagcgtgccggaactggccgaggacatcggcaaccgtttcgaccatgtgctggtc
gacgaatatcaggataccaaccggcttcaatcatccgtgctgatggcgttgaagccaggc
ggcaggggcctgacggtcgtgggcgacgatgcccagtcgatctattcgttccgggcagcg
acagtgcgcaacatcctggattttccgggcgagttcacccctccggccgacgtcatcacg
cttgatcgaaactatcgttccacccagacgatccttgccgctgccaacggcgtcatcgat
ctcgcccgggaacgcttcaccaagaacctctggaccgagcggcagtcggcggaaaggccc
aagctgctggcggtcgcggatgaagccgaccaggcgcgctatatcgtcgagaaggttctg
gagaaccgagagatcggcatgacgctgaagcagcaggcggtgctgtttcgctcgtcgaac
cacagcgggccgctcgaggtggagctgacccggcgcaatatccccttcgtgaaatttggc
gggctgaagtttctcgacagcgcccatgtcaaggacatgctggcggtgctcaggtttgcg
cagaacccgcgggatcgggtcgccggctttcgcctgctgcacatgatccccggtgtcggc
ccgcagacggccggcaagatccttgacgcgatcgccgccgacccggaaccgctggcagcc
ctcggggagatccccgccccgccgcggtccggcgacaactggcgggatttcgtcaccctg
atcgaggggctacgcaaacaggcaggcggctggccgggtgaaattgcccaggcacgcgaa
tggtacgagccgcatctcgaccgcatccacgaggacgcggacaccagaaaggccgacctc
ctgcaactggagcagatcgccggcggctatccgagccgggaacgcttcctgaccgaactg
acgctcgatccgcctgatgcgaccagcgaccaggccggcgtgccgctgcttgacgaggac
tatctgatcctttcgacgatccattcggccaaggggcaggaatggcgctcggtcttcatg
ctcaatgtcgtcgacggctgcatcccctccgatcttggcgtcggcaccacgcatgagatc
gaagaggagcgccggctgctctacgtcggcatgacacgggcaaaggacagcctgacgctg
atcaccccacagcggttcttcacgagcggccagcatgcgcagggcgatcgccacgtctac
gcctcgcgcacgcggttcattccggcaacgctcctgcagttcttcgagacggcatcctgg
ccggtggtcagcgcctcagcgtccgagcgcagcgccaggcagatccgcatcgatgtgggc
gcgcgcatgcggaccatgtggaagtaa
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