Ensifer canadensis: J3R84_28675
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Entry
J3R84_28675 CDS
T09166
Symbol
syrM
Name
(GenBank) nod/exo genes transcriptional regulator SyrM
KO
K25882
LysR family transcriptional regulator, transcriptional activator of nodD3 and syrA
Organism
ecaa
Ensifer canadensis
Brite
KEGG Orthology (KO) [BR:
ecaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecaa03000
]
J3R84_28675 (syrM)
Transcription factors [BR:
ecaa03000
]
Prokaryotic type
Helix-turn-helix
LysR family
J3R84_28675 (syrM)
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
UBI79443
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Position
pT173b:complement(59797..60777)
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AA seq
326 aa
AA seq
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MDQPTWKRPHRAKFAGVSDAAQQRQMPNLASIDLNLLVDLEALLQYRHITQAAQHVGRSQ
PAMSRALSRLRGMLKDDLLVAGSRGLVLTPLAECLTQMLPSVLDAIRQMMNLSLAPAQRR
WKVTMAMPDHQAVVLLPHLLPRLHERAPHLDIVTDPLFSGALGLLEQGEIDVVVGQMDAA
PLGYLRRRLYADSFTCVLRHNHPALAQEWTIEAFAALRHVAIASEPGELFGQIYDRLTKL
GLQRGDPMVVSTVLTAAVLIAATDSVLVVPSRVATRVAAMLSLAVIPPPVELRPYEVALI
WHERCHRDPEHRWLRGEIAAAASTAG
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggatcagcccacttggaagcggccacatagggccaaatttgccggtgtcagtgacgcc
gcacaacaacggcaaatgccgaaccttgcgtccatcgacctaaacctactggtggatctt
gaggctctgctgcagtaccggcacattactcaagcggcccagcacgtcggccgtagccaa
ccggcgatgagcagagccttgtcaaggctgcgcggcatgttaaaggacgatcttctggtt
gccggctctagaggcttggtcctgacgccgctggctgaatgcttgacccagatgctgcct
tcagtgctagacgcgattcgccagatgatgaacctcagcttggctccggcgcaacggcga
tggaaggtgacaatggctatgcccgatcaccaagcggtggttctgctgccacatctgttg
ccgcggttacacgagcgcgcccctcatctcgacattgtcaccgatccgctttttagcggc
gcgctggggttacttgagcaaggtgagatcgacgtggtcgtcgggcagatggacgccgct
ccgctcggctacttgcggcgcagactctacgccgacagcttcacctgcgtgctacgccac
aatcacccggccttggcgcaggagtggacgatcgaggctttcgcggccttgcgccacgtc
gccattgcctcggaacctggcgagcttttcggtcagatctatgacaggttaaccaaactc
ggactgcagcgtggtgatccgatggtggtttccaccgtactgaccgcggcggtcttgatc
gcggcgactgactcagtgctagttgtaccaagccgcgtggcgacgcgtgtcgccgccatg
ctgtcgctcgcggtgattcccccgcctgtggaactgagaccatacgaagtcgcgctgatc
tggcacgagcggtgccatcgagacccagagcatcgctggctgcggggcgaaatcgccgcc
gcagcgtccacggccggttag
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