Ensifer canadensis: J3R84_29020
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Entry
J3R84_29020 CDS
T09166
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ecaa
Ensifer canadensis
Pathway
ecaa00040
Pentose and glucuronate interconversions
ecaa01100
Metabolic pathways
ecaa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ecaa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
J3R84_29020
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
J3R84_29020
Enzymes [BR:
ecaa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
J3R84_29020
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
UBI79473
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All DBs
Position
pT173b:130041..130985
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AA seq
314 aa
AA seq
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MKNALTTRVGQGGRIVRVTGLIDVSQGRAYKTSAEMESRAKIVLPPRTTLIGVGTRAELQ
EAYVVVNSNDVIIRNLRIENPWDPQPAWNPNDGENGNWNSRFDAVTIDGAWNVWVDHVTF
TDGRRTDDQNGMQNGRPKQHHDGALDVRNGANFVTISYSIFRDHEKNNLIGSSDGADGED
SGRLKVTIHNTLFQNISARAPRVRFGQVHLYNNYHTGSMANRVYPFSHAHGVGKESRIFS
EANVFHIDGVKGCDKIAGNYGGRVYRDDGSLLNGATLVCSWNRQIGWRPPYSYTPLNAAE
VPANVLAKAGAGKL
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaacgccctgacgactcgcgttggccagggtgggcggatcgtccgcgtcaccggg
ttgatcgacgtcagccaggggcgggcctacaagacgtccgcagagatggaatcacgggca
aaaattgtacttccgcctcggacaaccttgattggggtcggaacaagggcggaacttcaa
gaggcatatgtggtcgtaaactcgaacgacgtaatcattcgaaatctaaggatcgaaaac
ccttgggatccacaacccgcctggaacccgaatgatggagaaaacgggaactggaattcg
cgatttgatgctgtgacgatcgatggggcctggaacgtttgggtcgatcatgtcaccttc
accgacggccgccggacagacgaccaaaacggaatgcaaaacggcaggcccaagcagcac
cacgatggcgcgctcgacgtgcgaaacggagcgaacttcgtaaccatctcgtattcgata
ttccgcgaccatgagaagaacaatttgatcggctcaagcgacggcgccgacggtgaggac
agtggtcggctcaaggttacgattcacaatactcttttccagaacatttccgcacgggcg
ccgcgcgtccgcttcggccaagtgcatctctacaataactatcacacaggaagcatggcg
aaccgcgtctatccgttttcacatgctcatggtgtgggtaaagaatccaggatcttttcc
gaggccaacgtattccacattgatggcgtgaagggctgcgataagatcgcaggtaattac
ggagggcgtgtctatagggacgacgggtcgctgctcaatggagcaacgctcgtttgctca
tggaaccgccaaatcggttggcggccgccctatagctataccccactgaacgctgcggaa
gtgccagcgaatgtgctcgcgaaggctggtgcggggaagctgtaa
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