Erigeron canadensis (horseweed): 122578054
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Entry
122578054 CDS
T07610
Name
(RefSeq) RAN GTPase-activating protein 2-like
KO
K14319
Ran GTPase-activating protein 1
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122578054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122578054
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
122578054
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
WPP
LRR_NLRC3
LRR_6
LRR_CARMIL
LRR_TMOD-LMOD
LRR_NLRC4
LRR_MHP1-HER1-GIP3
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
122578054
NCBI-ProteinID:
XP_043605857
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All DBs
Position
8:complement(4156172..4158576)
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AA seq
533 aa
AA seq
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MDSPVQHRLYSIKLWPPSQNTRQVLVERIIKNLTTPSILSRKYGLLSKEEAVEDAKQIES
AAYAIANHHFEKEPDGDGGSAVQLYAKESSTLMVEAVKRGPKEKEEEKSLFDISRGVRSF
IEDEEAKELLKPLQEPGNKYTKICFSNRSFGLNAARIAGPILSSLKGGQLTDVDLSDIVA
GRSEEEALQVMSMFSSALEGFGLRYLNLSDNAMGEKGVRAFSALLSSQSNLEELYLINDG
ISEEAAKALCELLPSTDKLKILHFANNMTGDDGAVAIAEILEKSPLLEDFRCSSTRVDSQ
GGIALSEALAKCAHLKKLDLRDNMFGVEAGRALSKSVSEFTHLSEIYLGYLNLENDGTLA
LIEALKASAPRLEVLELSGNEITSQAAPALASFMAARKETLKKIILSENELKDDGAIVIA
NALEEDFPQLAEVDLSTNQIRRAGARVLAQAVVGKPGFKLLNIDGNFLSDEGVDDVKEIF
KNSPDLLGSLDENDPDGEEYDNEADEDEDGDGDDDDDELESKLKGLDIKQEDN
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggattctcctgtccaacaccgcttgtactcgatcaagctttggcctcctagccaaaac
acaaggcaagtgctcgtggagcgcataataaagaatctcacaactccatcaattttatca
agaaagtatggtcttttaagcaaagaagaagcagtcgaagatgctaagcaaatcgagtct
gcagcctatgctattgcaaaccaccactttgaaaaggagccagatggtgatggtggttct
gctgtgcagttatatgctaaagaatcgagtacactaatggtggaagctgtcaagagaggc
cctaaagaaaaagaggaagaaaaatctttatttgacatttcccgaggagtgcgatctttc
attgaggatgaagaggctaaggaactgctaaaaccactgcaagagcctggaaacaagtat
accaagatatgttttagcaaccgaagtttcgggttgaatgccgcccgtattgctggcccc
attttgtcctctctcaaggggggtcagttgactgatgttgacctatcagatattgttgct
ggaaggtcagaggaagaggcccttcaagtaatgagtatgttctcgtcagctcttgaaggt
tttggcctgaggtatctcaacctttcagacaatgctatgggcgaaaaaggggttagggca
ttcagtgcgcttttgagttcacaaagtaatctcgaggagttgtatctcatcaatgacggt
atctctgaggaagctgcaaaggctctgtgtgagttacttccgtccacagataagttaaaa
attcttcattttgctaacaacatgactggagatgatggggcagttgccattgctgagatt
ctggaaaaatctccattgttagaggatttcaggtgttcgtctactcgggttgactctcaa
gggggaattgcgttgtctgaagcacttgccaagtgtgcccatctgaaaaagctagatctt
cgtgacaatatgtttggagttgaggctgggcgtgctttgagtaaatctgtctctgagttt
acccatctctctgaaatttacctcggttacttgaatttggaaaatgatggaactttagca
cttatcgaggctctcaaagcttctgcccctcgcctagaagttctagaactatctggaaac
gaaattacttctcaagcagcgcctgcattagcatcctttatggctgcgaggaaagaaact
ctaaagaagataattttatctgagaatgaattgaaagatgatggtgctatagtgattgca
aatgctcttgaggaggattttccacagttggccgaagttgacctgagcaccaatcagatt
agaagggctggagctcgagtcctggcccaggcagttgtaggtaaaccaggatttaagttg
ctgaatattgatggtaacttcttatctgacgaaggggttgacgatgtgaaagagattttc
aagaattcgcctgatctgcttggaagtttggacgaaaatgaccctgatggtgaagagtat
gacaatgaggctgatgaggatgaggatggggatggtgacgatgatgacgacgagttggaa
tccaaactcaaggggcttgacattaagcaggaagacaattag
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