Erigeron canadensis (horseweed): 122578102
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Entry
122578102 CDS
T07610
Name
(RefSeq) transcription factor HY5-like
KO
K16241
transcription factor HY5
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
122578102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecad03000
]
122578102
Transcription factors [BR:
ecad03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
Plant bZIP factors
122578102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
bZIP_Maf
FlaC_arch
GIT_CC
GAS
AAA_11
Phlebovirus_NSM
HAUS-augmin3
XhlA
TSC22
DMPK_coil
Motif
Other DBs
NCBI-GeneID:
122578102
NCBI-ProteinID:
XP_043605917
LinkDB
All DBs
Position
8:22740695..22743084
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AA seq
155 aa
AA seq
DB search
MQEPTSSLVASLPSSSERSSSSALQIEVKEGMESDDEIRRVPEMGGQGIVGASMSGSGTF
PGPDQVQSIGAGSKKRGRNPADKENKRLKRLLRNRVSAQQARERKKAYVSELEVRVKEIE
KKNSELEERLSTLQNENQMLRQILKNTTASMQDKK
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaccaacaagttcattggtggcaagtttaccttcaagtagtgaaagatcttct
agttctgctcttcaaattgaagtcaaagaaggaatggaaagtgatgatgagataagaaga
gtgccggaaatgggtggacaaggtattgttggagcatcaatgtccggttcgggtacgttt
ccaggtccagaccaggttcaaagcataggcgctggttcaaaaaagagaggaagaaaccca
gctgataaagaaaacaaacgtttaaagaggttgttaaggaatcgtgtttcggctcagcag
gcaagggagagaaagaaggcatacgtgagcgagttggaggtgcgtgtaaaagaaatcgag
aagaagaactctgagcttgaagagcggctctcgacgcttcaaaatgagaaccagatgctt
agacaaatcttgaagaacactacagccagtatgcaagataaaaagtag
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integrated database retrieval system
