Erigeron canadensis (horseweed): 122578137
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Entry
122578137 CDS
T07610
Name
(RefSeq) photosynthetic NDH subunit of lumenal location 5, chloroplastic
KO
K03768
peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:
5.2.1.8
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ecad03110
]
122578137
Enzymes [BR:
ecad01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
122578137
Chaperones and folding catalysts [BR:
ecad03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
122578137
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GFIT
Motif
Pfam:
Pro_isomerase
Motif
Other DBs
NCBI-GeneID:
122578137
NCBI-ProteinID:
XP_043605967
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Position
8:43843843..43846131
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AA seq
249 aa
AA seq
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MALSFTSLSNVGSVSAPRSFSSVKAVNTSSFSGINVGKSSNLLSTSLRLSSSPNPNVQLK
SRATLSVRATAQEVATQAKVTNKVYFDISIGNPVGTLAGRIVIGLFGDDVPQTAENFRAL
CTGEKGFGYKGSAFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENFNLVHTGPGIVS
MANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIVKLIESQTTDRGDRPTKRVVI
SDCGELPLV
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggctctctcatttacatctctgtcaaacgtcggctcggtctcagctccccgaagtttc
tcgtcggtgaaagccgtgaatacgtcgtcgtttagtggtatcaatgttggtaaatctagt
aatttattatctacctccctccgcctgagctcttcacctaaccctaatgttcagctcaag
tctcgagctaccttgtccgtcagggccactgctcaggaggtagctacacaagctaaagta
acaaacaaagtgtattttgacatcagcattggaaacccagttgggacacttgctggaagg
attgtgattgggctttttggtgatgatgtgccccaaacagctgaaaatttccgtgcttta
tgtacaggagagaaaggttttggttacaagggatctgcatttcatcgtgtcattaaggat
ttcatgattcaaggaggcgacttcgacaagggcaatggaactggtggcaagagcatttat
ggccggacatttaaggacgagaactttaacttagttcatactggaccaggaattgttagt
atggcaaatgcaggccccaataccaatggaagtcaattcttcatatgcacagtcaagact
ccatggttggaccagaggcacgttgtgtttggacaagttttggagggcatggacatagtt
aagctgattgagtcccaaaccacagacagaggtgaccgcccaacaaaacgagtcgttatc
agtgactgtggtgagcttccattggtctaa
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