Erigeron canadensis (horseweed): 122578188
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Entry
122578188 CDS
T07610
Name
(RefSeq) AP-1 complex subunit gamma-2-like
KO
K12391
AP-1 complex subunit gamma-1
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
122578188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122578188
Membrane trafficking [BR:
ecad04131
]
Endosome - Golgi transport
Others
AP-1 complex
122578188
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptinC2
INTS1_R4
Cnd1
HEAT_2
V-ATPase_H_C
Cnd3
DUF5578
Motif
Other DBs
NCBI-GeneID:
122578188
NCBI-ProteinID:
XP_043606028
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All DBs
Position
8:40758916..40768184
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AA seq
877 aa
AA seq
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MNPFSSGTRLRDMIRAIRACKTAAEERAVVRKECAAIRAAVSDNDNDYRHRNLAKLMFIH
MLGYPTHFGQMECLKLIAAPGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHTNQY
IVGLALCALGNICSAEMARDLAPEVERLLQFRDPNIRKKAALCSIRIVKKVPDLAENFVN
PVVSLLKEKHHGVLLTAIQLCTDLCNLNEEALEFFRKKCTEGLVRVLKDVVNSPYAPEYD
IAGIADPFLHIRLLRLLRVLGHGDPDASDSMSDILAQVATKTESNKNAGNAILYECVETI
MSIEDNSGLRVLAINILGRFLSNRDNNIRYVALNMLMKAVSVDDQAVQRHRATILECVKD
SDASIRKRALELVYLLVNENNVKPLTKELIDYLHVSDQDFKGDLTSKICSIVEKLSPDKI
WYIDQMLKVLSEAGNHVKDEVWHALIVVITNASNLHGYTVRSLYKALQTSADQETLVRVA
VWCVGEYGDMLVNSIGMLDLEEPITVTENDAVDVVEIAIKRHTSDLTTRAMCLIALLKLS
SRFPSCSQRIKDIVTQSKGSLLLELQQRSIEIDSIIGKHQNIRSALVERMPVLDEATFSG
RRAGSIPATVSTSQGTSLNLPNGVAKTAAAPLVDLLDLAADEPAVPTSSSANFLQDLLDI
GAPPPSSQSGTAQAQKSGTDVLLDLLSIGSPPPQNGSSAHDILSLSHDNKTSVSPLDSLS
STIGHSVQPSSSTRNAPVMDLLDGFGSSPPAPKDNIPAYPPIVAFESSSLKLMFNFSKQP
GSPHITEVEANFTNKSSDVYADFIFQAAVPKFLQLHLEPASSNTLPGNGNGSITQKLRVT
NNQHGKKSIVMRIRISYKLNNKNMLEEGQISNFPRDL
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgttttcctccgggacgcgtctacgggacatgattcgggcaatacgtgcttgc
aaaactgctgcagaagagcgtgctgttgttagaaaagaatgtgcggctattcgtgcagca
gttagcgataatgataatgattatagacatcgaaacttggcaaagctcatgttcattcac
atgctaggatatcccacacattttggtcaaatggaatgcctcaagttaatagcagctcct
gggttccctgagaagagaataggatatcttggacttatgctgcttcttgatgaaagacaa
gaagttttgatgctggtcaccaattcactaaaacaagatcttaaccataccaaccaatac
attgtgggactagctctttgtgctttgggcaatatatgttcagctgaaatggctcgtgat
cttgcccctgaagtcgaaagattgctgcaatttcgagatccaaatattcggaagaaagca
gcattatgctcaataaggattgtaaagaaagtcccagaccttgcagaaaattttgtgaac
cctgttgtttccttactcaaagaaaaacatcatggagttcttttaactgcaatccagctc
tgtacagatctctgtaatcttaatgaagaggctcttgaatttttcaggaagaaatgcaca
gagggattagtgagagttctgaaggatgttgtcaacagtccatatgctcctgaatatgac
attgcagggattgcagacccttttcttcatataaggctgcttcgtctgttgcgtgtcttg
ggccatggagatcctgatgctagtgattctatgagtgatattcttgctcaggtggcaaca
aaaaccgagtcgaacaagaatgctggaaatgcaattttatatgaatgtgtagaaactatc
atgagcattgaagataatagcggcctgcgtgttcttgcaatcaatattttgggacgattc
ttgtctaaccgtgacaacaatatccgatatgttgcattgaacatgctgatgaaagcagtt
tcagtagatgatcaagcagtgcagagacatcgtgcaacaatcttagaatgtgtgaaggat
tcagatgcttcaattcgtaaaagagctcttgaacttgtatatcttctggtgaatgagaac
aatgtaaaacctttgaccaaggagttaattgattatctgcacgtaagtgaccaggacttt
aagggagatctcacttcgaaaatttgctccattgtggagaagctttccccagacaaaatt
tggtacattgaccagatgctaaaggttctctccgaggctggaaatcacgttaaggatgaa
gtatggcatgctcttattgttgtgataaccaatgcttctaacctccatggatatacagtg
cgttcactctacaaggcactccaaacctcagctgaccaggaaacacttgttcgagtggct
gtatggtgtgttggagaatatggtgacatgctggtaaacagtattggaatgcttgatctg
gaggaacctataactgtaacagagaatgatgctgtggatgttgttgaaattgcaatcaag
cgccatacatcagatcttacaaccagagccatgtgtttgattgctttactgaaactgtct
tcccgtttcccttcttgctcacagagaataaaggatattgttactcaatctaaaggaagc
cttctgcttgaactgcagcagaggtccatcgaaattgattctataattggaaagcatcag
aacataaggtctgccttggttgaaaggatgccggtgcttgatgaagcaactttcagtgga
agaagagctggctctattccagcaactgtttcaacttcccagggaacttctctaaatctt
cctaatggagttgctaaaacagctgctgctccactagtagacttgttggatttggcagca
gatgaacctgcagtacccacctcttcgagtgccaactttcttcaggatcttcttgatatt
ggtgcacctcccccttcatcacaatcaggtacagcccaggctcaaaagagtggcacagat
gttctgttggacttgctgtcaatcgggtcaccacctccccagaatggttcatctgcacat
gacatattatcactaagtcatgataataagacttcagttagtccattagatagtctttca
tcaactatagggcattctgttcaaccctcttcttcaacacgaaacgccccagtgatggat
ctgttagacggatttggttctagtcctccagcacctaaagacaatattcctgcatatccc
ccaatagttgcttttgaaagcagctctttgaagttaatgttcaacttttccaagcaacct
ggaagtccacatataaccgaagttgaagcaaacttcacaaacaagtcttccgatgtttat
gcagacttcattttccaggcagcagttccaaagtttcttcagttgcatttagaacctgcc
agtagtaacactcttcctggaaatggtaacgggtcaataactcagaagttacgagtaacc
aacaatcaacatggcaagaaatcaattgttatgcgcataagaataagttacaagttgaac
aacaaaaatatgttggaagaaggacaaatcagtaacttccctcgtgacctatga
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