Erigeron canadensis (horseweed): 122578208
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Entry
122578208 CDS
T07610
Name
(RefSeq) chaperone protein ClpB4, mitochondrial
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ecad03110
]
122578208
Chaperones and folding catalysts [BR:
ecad03110
]
Heat shock proteins
HSP100
122578208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
ClpB_D2-small
AAA
AAA_5
AAA_22
AAA_16
Sigma54_activat
AAA_14
nSTAND3
IstB_IS21
ATPase_2
NBD_SMAX1
AAA_18
AAA_7
AAA_24
Zeta_toxin
TniB
Torsin
HOOK
NACHT
AAA_25
Mis12
Motif
Other DBs
NCBI-GeneID:
122578208
NCBI-ProteinID:
XP_043606052
LinkDB
All DBs
Position
8:complement(45783239..45788015)
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AA seq
979 aa
AA seq
DB search
MATTVMIRRTAATKLTKSALILLLDGSQSRFRFSSLAPDSHILSSNYHAARHVSPNHILV
PNVGPNSNSSRSTMMMSFSNPTTRRLFSTCTDSSNQFNDKNYTEMAWEGIVGAVEAARGS
KQQIVESEHLMKALLEQKDGLARRILTKAGLDNSSVLQATNNFIAQQPTVSDASAPRLGP
HLNTLLENARKFKKEMGDDFVSVEHLVLAFLSDKRFGKQLFTNLQLSEQSLKEAVQAVRG
NQKVTDQNPEGKYQALEKYGNDLTELARKGKLDPVIGRDDEIRRCIQILSRRTKNNPVII
GEPGVGKTAIAEGLAQRIVRGDVPEPLKNRKVISLDMGSLLAGAKFRGDFEERLKAVLKE
VTASNGQIVLFIDEIHTVVGAGAAGGAMDAGNLLKPMLGRGELRCIGATTLNEYRKYIEK
DPALERRFQQVFCDQPSVEDTISILRGLRERYELHHGVKISDGALVSAAVLADRYITERF
LPDKAIDLVDESAAKLKMEITSKPTELDEIDRAVLKLEMEKLSLKNDTDKASKERLTKLE
SDLESLKQKQKELNDQWESEKALITRIRSIKEEIDRVNQEMEAAERDYDLNRAAELKYGT
LMNLQRQLVEAEKNLSDYQHSGKSLLREEVTDIDIAEIVSKWTGIPLSNLQQSERDKLVS
LENVLHKRVVGQDMAVKSVADAIRRSRAGLSDPNKPIASFMFMGPTGVGKTELGKALASY
LFNTENALVRIDMSEYMEKHAVSRLVGAPPGYVGYEEGGQLTEAVRRRPYSVVLFDEIEK
AHHDVFNILLQLLDDGRITDSQGRRVSFTNTVVIMTSNIGSHYILDTLQSTHDSKDAVYD
LMKRQVVELARKTFRPEFMNRIDEYIVFQPLDASQIRHIVEIQLNRVKGRLKQKKIDLHF
TKEATDILGKLGFDPNFGARPVKRVIQQMVENEISMGILRGDFNEDDTIIVEASSSAKDG
VQIRKLESQAGVEDMVANN
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggctactacagtcatgattcgtcggacagccgcaaccaagctcactaaatccgctctt
attcttcttctcgacggctctcaatcacgcttccgtttctcatctctcgctcctgactcc
cacattttatcatccaattatcatgccgccagacatgtctcccccaaccatatacttgta
cctaatgtcggacctaacagcaacagcagcaggagtacgatgatgatgtctttctcaaac
cctactactcggcgccttttttccacttgtactgattcatctaatcagttcaatgataaa
aactacactgagatggcgtgggaggggattgttggtgccgtagaggcggcacgaggcagc
aaacaacaaattgtggagtctgagcatttaatgaaagcccttttggagcaaaaagacggt
ttagcaagacgaatactaacaaaggccggtttagataactcatcggttctgcaagctaca
aataactttatagctcaacagccaacggtcagtgatgcaagtgcccctagattaggcccg
catttgaatactttgttggaaaatgcaagaaaattcaagaaagaaatgggggatgatttt
gtttctgtggaacatcttgtgttggctttcctttcggataagagatttgggaagcaattg
ttcacaaacctgcagctgagtgagcaatcgttaaaggaagctgttcaagctgtccgtgga
aatcagaaagtaactgatcaaaaccctgagggtaaataccaggcactggaaaaatatggt
aatgacttgactgaacttgctagaaagggtaaacttgacccagtgataggccgggatgat
gaaatcaggcggtgcattcagatattgtctagaagaacaaaaaataaccctgttatcatt
ggtgagcctggtgtcgggaaaactgcaattgctgaaggattagctcaaagaatcgtacgt
ggagatgtccccgagcctctcaagaatcgtaaggtgatttcccttgatatgggctcattg
cttgctggtgctaaattccgaggagattttgaggagcggcttaaagctgttcttaaagag
gtcactgcctccaatggccaaattgttttattcatcgatgaaattcataccgttgttggt
gctggagctgctggtggagcaatggatgctggaaatttattaaaaccaatgcttggtcgg
ggtgaacttcgatgtattggagctacaacattaaatgaatacagaaaatacattgaaaag
gaccctgctttggaacgtaggtttcaacaagtcttttgtgatcaaccgtctgttgaggac
acaatatccattcttcgtggactgcgtgagcggtatgaattacatcatggtgttaaaata
tctgatggtgccctcgtttctgctgctgttcttgcggatcgatacataactgagcgcttc
ttgcctgacaaagcaattgatctggtagacgaatctgctgcaaaacttaaaatggagatt
acatctaagcccactgagttggacgagattgatcgagctgtgctgaagctcgagatggag
aaactatctctcaaaaacgacactgataaagcatcgaaggaacgattgaccaaactggaa
agtgatttagaatctttgaaacaaaaacagaaagagttaaatgatcagtgggaaagtgaa
aaggcgctgataacccgcataaggtccatcaaggaggagattgatagggtaaaccaagaa
atggaagcagctgaacgtgattatgatctgaaccgtgcggctgaactcaaatatggaaca
ttaatgaatcttcaacgccagttagttgaagccgagaaaaatctttctgactatcagcat
tctgggaaatctttgttgcgtgaagaagttaccgatattgacattgctgaaattgttagc
aaatggacgggaatacccttatcaaatctccaacagtcagagagagataaacttgtgtca
cttgaaaatgttctgcataagagagttgttggtcaagatatggcagtcaaatctgttgca
gacgcaatacgacgctcacgagcaggactctctgatccaaacaagccaatagctagtttc
atgttcatgggcccaacgggtgtcggaaagaccgagcttgggaaggccctggccagttac
ctcttcaacacagagaatgctcttgtgaggattgatatgagtgagtatatggaaaaacat
gctgtctcgagattagttggcgcgccacccggctatgttggatatgaagaaggtggtcaa
cttactgaggcggtgcgtcggaggccatactctgtcgttctttttgatgaaattgagaag
gcacatcatgatgtgttcaacattctgctacaattgttagatgatggacgaataaccgat
tcacaaggaaggagagttagctttacaaatacggtggttataatgacatctaacattggg
tcacattatatattggatacccttcagagtacccatgatagcaaggacgcggtttatgat
ttaatgaaaaggcaggttgttgaattggctaggaagacctttcggccagagttcatgaat
aggattgatgaatatatcgttttccaaccacttgatgcatcacaaatcagacatattgtt
gagattcagttgaatcgtgtgaaaggcaggctgaaacagaaaaaaatcgaccttcatttt
accaaggaagctactgacatacttgggaaacttgggtttgaccccaactttggagcaagg
ccggtcaagagagttattcagcagatggttgaaaatgagatttctatggggatattaaga
ggagactttaatgaagatgatactataattgtggaagcttcctcgtcagccaaggatggt
gtgcagattaggaaactagagagccaagcgggagtggaggacatggttgcgaataattaa
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