Erigeron canadensis (horseweed): 122578234
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Entry
122578234 CDS
T07610
Name
(RefSeq) polypyrimidine tract-binding protein homolog 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecad03041
]
122578234
Spliceosome [BR:
ecad03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122578234
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_8
Motif
Other DBs
NCBI-GeneID:
122578234
NCBI-ProteinID:
XP_043606082
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All DBs
Position
1:complement(24980282..24985508)
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AA seq
447 aa
AA seq
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MASVSSQPQFRYTQTPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
EFAEQNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTSADVAGNVLLVTIEGN
DARSVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFTDSDTATSAKDSLDGRSIPRYL
IPDLGPCSLKITYSAHTDLSVKFQSHRSRDYTNPMLPVASSAIDATGQFSLGLDGKKIES
ESNVLLASIENMQYAVTLDVLQMVFSSFGPVLKIAMFDKNGGVQALIQYPDVQTAVVAKE
ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTMPAAPMMNNTQPSILGQQPPQA
GPQYGATQYMPGPEGYAAAPQSSAGWAPGAPAGPQSMPMQMQQQQQMQHHPYMPQQGMPS
EMGPGPTQYNGQNGYPPQSGAPPRYHQ
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgtatctagtcagcctcagtttcggtacacgcaaactccgtcgaaagttctt
catttgaggaacttgccgtgggagtgtaccgaagaggagcttatcgagctcgggaagccg
ttcggtaaagtcgtcaatactaagtgtaatgttggagctaatagaaaccaagcctttatt
gaatttgctgaacaaaatcaagcgattgcaatgatttcgtattatgcatcatcgtctgaa
ccggctcaagtacgagggaaaacagtgtatttacagtattcaaacaggcaggagattgtg
aacaacaagacgtctgcggatgtggcagggaatgtgctgttggtaactatcgagggtaat
gatgctcgctctgtcagcattgatgtgttacatctggtgttctcggcatttggatttgtg
cataaaattacgacttttgagaagacagctgggttccaggctttggtgcagtttacagat
tcagacactgctacttctgccaaggattctcttgatggacggagtattcctagatattta
attccagatctagggccatgttctctaaagattacttattctgcacatacagatttgagt
gtcaagttccagagtcatcggagcagggactataccaaccctatgcttcctgttgcatct
tcagcaattgatgctactggtcagttcagtttgggtttagatgggaagaagattgaatct
gagagtaatgttcttcttgcttcgattgagaacatgcagtatgcagtcactctggatgtg
ttgcaaatggttttctcttcgtttgggcctgttttgaagattgccatgtttgacaaaaat
ggaggagtccaagctttaattcaataccctgatgttcagacggctgtggttgccaaggaa
gctttggaagggcactgcatatatgatggagggttctgcaagcttcatatatcttactct
cggcacactgatctaagtattaaggtcaacaatgatcgaagtagagattacacaatgcca
gctgcccccatgatgaacaacacacaaccctcaatcttgggacagcaaccaccccaggcc
ggcccccaatacggtgccacccagtacatgcctggtccagaaggatatgcagcagcccct
cagtcttcagcagggtgggctccaggtgcacctgcagggcctcaatccatgccaatgcag
atgcagcagcagcagcagatgcagcatcacccctacatgccacaacagggtatgccatct
gaaatgggtcctgggccgacccaatacaatggtcagaatggctaccctcctcagagtgga
gcaccgcctcgttaccatcaatag
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