Erigeron canadensis (horseweed): 122578254
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Entry
122578254 CDS
T07610
Name
(RefSeq) WD repeat-containing protein DDB_G0290555
KO
K14841
ribosome biogenesis protein NSA1
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecad03009
]
122578254
Ribosome biogenesis [BR:
ecad03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
122578254
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
WD40_Prp19
WDR55
WD40
Beta-prop_DCAF12
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
122578254
NCBI-ProteinID:
XP_043606105
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All DBs
Position
8:34044117..34049415
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AA seq
476 aa
AA seq
DB search
MPRTTTVESTSCPPLRALTFDVLGLIKVTEARSRQGGVPKIVETWGKPDSSRCVLAASSD
DRQIDPMLAVARKSGSVDLLSFINGETRVSLPGNNQADVQSEEDNIVGLHLFKKKTCEST
SSSCTLLTCTMKGLASLRSVTLSNSLGDSTSDDIPTTWNVCAAGNVLCSKVDESENYALF
GGKGVEVNIWDLTTHTKIWTAKSPPKNSLGIFTPTWFTSATFLSKDDHRKFVAGTNSHQV
RLYDMSTQRRPVMSVDFRETPIKAVTEDNDGNTIYIGNGSGDLASIDIRTGKILGCFLGK
CSGSIRSIARHPHLPIIASCGLDSYLRIWDIESRQLLSSVFLKQHLTDVVFDSHFDDEEV
AASTAAPFLPPSEQNIDDEVDRDEESLRPIVKRKKKTSKSRTVEGDDEDSQSAKRSKKAQ
NINGEGDSTKRKEAKISQDAVKSEEIFSNDQEKPKKSKDRKSKKTSKKTKGESIDV
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgccgagaacaacaacagttgaatcaacaagctgtcccccactccgtgcccttactttt
gacgttcttggtctcattaaagttactgaagctaggagtaggcaagggggagtgcccaag
atagtagaaacatgggggaaacccgattcgtctcgttgtgtgctcgccgcttcttccgat
gaccgtcaaattgatcctatgttagctgttgcaaggaaaagtggttctgttgacttgctt
agcttcatcaatggtgaaactcgagtttcacttcctggtaacaaccaagctgatgttcag
tcagaagaggataacatagttgggctgcatttgtttaaaaaaaagacatgcgagtcaaca
tccagttcatgcaccttgcttacatgcacgatgaaaggtcttgcaagcctaagatctgtt
acactttccaattcactaggggactcaacctctgacgatatcccaacaacgtggaatgtg
tgtgcagctggtaatgtcttgtgctctaaagttgatgaaagtgaaaactacgcgttattt
ggagggaagggtgtagaagttaatatttgggatctcacgacacacacaaaaatttggaca
gcaaaatcaccccctaaaaacagccttggaatatttacacctacttggtttacttcagca
acatttttaagcaaagatgatcaccgcaagttcgtggcaggcaccaacagccatcaggta
cgtctttatgatatgtctactcaaagaagaccagtcatgtcagtcgactttcgagagacc
cctattaaggcagtcactgaagataacgatggtaatacaatatacattgggaatggatct
ggtgatcttgcatctattgacatacgcacaggaaaaattttgggatgctttttggggaaa
tgctctggaagcatcagatcgatagctagacatccacacctaccaattatagcctcttgt
gggctcgacagctatttacgcatatgggatatagaatcaaggcaattactttcttcggtc
ttcttgaagcagcatcttacagatgtggtctttgactcccattttgatgatgaagaagtt
gcagcctctacagcagcaccttttttgcctccaagtgaacaaaatattgatgatgaggta
gacagagacgaggagtcgctgcgacctatcgttaaacggaaaaagaagacgtccaaatcc
cgcactgttgaaggagatgatgaagattcacaatctgctaaacggtcaaagaaagcacaa
aacataaatggagaaggggactctaccaaacgaaaagaggccaaaatatcacaagatgct
gtcaaaagcgaggaaatattctctaatgatcaggaaaagcccaaaaaatctaaggaccgc
aaatcaaagaagacatcaaagaaaactaaaggtgaaagcattgatgtataa
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