Erigeron canadensis (horseweed): 122578309
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Entry
122578309 CDS
T07610
Name
(RefSeq) F-box/LRR-repeat protein 14
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122578309
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122578309
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
LRR_FBXL15
LRR_SKP2
LRR_6
LRR_At5g56370
F-box-like
F-box_5
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
122578309
NCBI-ProteinID:
XP_043606175
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All DBs
Position
8:complement(35230687..35233429)
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AA seq
470 aa
AA seq
DB search
MVTMDNLPDQLVWEIFSRIEKTVDRNSISLASKHFHNLDNEQRKYLRIGCGLNPANEALT
CLCLRFPNLSKIEITYAGWMSKLGKQLEDPGLSVLSNSCPFLTDVTLSYCTFISDAGLST
LAACSKLSSLKLNFTPRLTGCGIFSIVVACKNLKVLHLIRCLNVSNLEWLECLGGLETLE
DLCVKNCRGIGEGALVKLGPTWRNIKHLQFEVDSNYRYMKLYDRLAVDRWQQQFVPCENM
VELSLINCMISPGRGLACLLDKCKNLEKIHLDMCIGARDCDIIGMAQSSRNLRSISIRVP
SDFSLPLLMEHPLRLTDDSLKALAQNCTLLESISLSFSDGEFPSLSSFSLNGILNLIITC
PVKNLSLDRVYSFNNIGMEALCSCAHLETLELVRCQEISDEGLELVAHHPILRVLRLTKC
LGVTDDGFKPLIGSCKLELLAVNDCPQVSYMGVQGAAKSVSFRQDLSWMY
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggttactatggataatctccctgatcaattagtttgggagatttttagtagaattgag
aaaaccgttgatcgaaattccatatctttggctagtaaacacttccataatcttgataac
gaacaaagaaaataccttcgtattggctgcggattgaaccctgcaaatgaagcgttgacc
tgtctatgcctcaggttcccaaacttaagcaaaatcgaaattacatacgctggttggatg
tccaagttaggcaaacagttagaagaccctggtctttctgtactttccaacagctgcccg
tttttaacagatgtcaccttaagttattgcacttttataagtgatgcgggtcttagcact
ttagctgcgtgctccaaactttcatcattgaaattgaatttcaccccaaggcttaccggc
tgtggcatattttcaatcgttgtggcctgcaaaaatcttaaagtccttcatcttatacgc
tgtttgaatgttagcaaccttgagtggcttgaatgtcttggcggactggaaactcttgaa
gatttgtgtgtgaagaactgtagggggataggggaaggtgctcttgtaaagcttggacct
acatggcgtaacataaaacatttgcagtttgaggttgattcgaattatcggtacatgaag
ctttatgatcggttagctgttgacagatggcaacaacagtttgtcccatgtgaaaacatg
gtagagcttagcttgataaattgtatgatcagcccgggaagagggctcgcttgtttatta
gacaaatgcaaaaacttggagaaaattcacttagacatgtgtataggagcccgagactgt
gacatcattggtatggcccagagctcaagaaatcttcgatctatatcaattagagtaccg
tcagatttttcacttcctttattaatggaacacccattgagactcacagacgatagcttg
aaagcattggctcagaactgtacacttctcgaatcaatctcattgtctttctcagacggt
gagtttccttcattgtcttcattttctcttaacggaattcttaatttaatcataacttgc
cctgtgaaaaacctgtctcttgatcgtgtttattcctttaacaatattggaatggaagct
ctttgttcttgtgctcatcttgaaaccttagaacttgttagatgccaggagataagtgat
gaaggactagaacttgtagcccatcacccgatattgcgtgtattgcgattgaccaagtgt
cttggagtcactgatgatgggttcaagccacttattggttcttgcaaactggaacttctt
gctgtgaatgattgccctcaagtatcttatatgggtgtgcaaggagctgcaaagtctgtg
tcttttagacaagatttgtcatggatgtattaa
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