Erigeron canadensis (horseweed): 122578314
Help
Entry
122578314 CDS
T07610
Name
(RefSeq) alpha-mannosidase isoform X1
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
122578314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122578314
Enzymes [BR:
ecad01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
122578314
Membrane trafficking [BR:
ecad04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
122578314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Glyco_hydro38C2
Laman-like_dom
Motif
Other DBs
NCBI-GeneID:
122578314
NCBI-ProteinID:
XP_043606181
LinkDB
All DBs
Position
8:8732976..8740835
Genome browser
AA seq
996 aa
AA seq
DB search
MSNLLKFSNFLWVFIVFAVFFCELIYGYETGSKIVEGKLNVHLVPHSHDDVGWLKTVDQY
FIGSNNSIQGACVENVLDSVVMSLLRDPNRKFIFAEMAFFRRWWLLQSGEIQAAVKKLVA
AGQLEFVNGGWCMHDEAATHYVDMIDQTTLGHALIKCNFNVTPRAGWQIDPFGHSAVQAY
LLGAELGFDSLHFARIDYQDRAKRKDDKSLEVIWRGSKTFGSSSQIFTNAFPKHYSAPDG
FNFEVSGDFEPVQDEPLLFDNNVQKRVNDFIDAALTQANVTRTNHIMWTMGDDFQYQYAE
SWFKQMDKLIHYVNRDGRVNALYSTPSIYTDAKMAANVSWPLKTDDYFPYADGGDSYWTG
YFTSRPALKGYIRSLSGYYLAARQLEFLAGRQTKGPNTFSLGDALGIAQHHDAVTGTAKQ
HTTNDYEKRLAIGALEAEAVVTSALSRLTSTTSNCTKPTSIFSQCPLLNISYCPATENIP
STKSLVVVAYNPLGWNRTDVIKIPVKDVNFVVQDNNGNTIEAQFIEFNNVTSNIRSFYTE
AYLGISPQDVPKYWLIFQAAVLPLGWNTYFITETSEKGGYVSVVDTPQNDTIEIGPGNLK
MSFSLQSGQLKRVTNSRTGINLPIQQSYLWYGSGADNQPSGAYIFHPDGAPPVIVSRSVP
IKVIRGPLVDEVHQQFNPWIYQVTRLYKEKEHAEFEFIIGPIPTDDGVGKEVITRITADM
ATNKVFYTDSNGRDFLKRVRDYREDWPLQVTQPVAGNYYPLNLGMFTTDSKTELSILVDR
ATGGASIKDGQMEIMFHRRMLYDDGRGVGEALDETVCNKTTCQGLAIQGNYYMSVDHIGS
GSRWRRTTGQEIYSPLLLAFTHEKQEDYKASHSTRSTTMDPNYSLPLNVALLTLQELDDG
CVLLRLAHLYEAGEDVDYSTLTKVELKKLFSSKTIKTINETSLSANQDKSAMKRTPWKVE
GGKGSESAIVRGAPVDPSALIVELGPMEIRTFILKF
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatttgttaaaattttctaactttttgtgggtatttatagtttttgcggttttt
ttttgtgagttgatttatgggtatgaaactggaagtaaaattgttgagggaaagttgaat
gttcatttggttccacattcacatgatgatgttggttggttaaagacagttgatcagtat
ttcattgggtctaataatagtatacagggtgcttgtgttgaaaatgtgcttgattcggtt
gtcatgtcgctgcttcgtgatccaaacaggaaattcatatttgccgagatggcctttttc
cgaagatggtggctattgcaaagtggagagatccaagctgctgtgaaaaagcttgttgct
gcaggccaattagaatttgtaaatggagggtggtgtatgcacgatgaagcagctacgcat
tacgtagacatgattgaccaaacgactttgggccatgccttaataaaatgtaattttaat
gtaactcctcgagctggttggcagattgatccatttggacattctgcagttcaagcgtac
cttttaggagcggagcttgggtttgattcattacattttgcacggattgattatcaagat
agggcaaagaggaaggatgataaaagtcttgaagtcatatggcgtggctccaaaacattt
ggttcttcctctcagatatttaccaatgcatttcctaagcactacagtgcaccagatggt
ttcaactttgaagttagcggagactttgagcccgttcaggacgaacctcttctctttgac
aataatgttcagaaacgagtaaacgatttcattgatgctgcattgactcaagcaaatgtg
accagaacaaaccatattatgtggacaatgggagatgacttccaataccagtatgcagag
tcttggttcaagcagatggacaagctaattcactacgttaacagagatggtcgtgtaaat
gcattatattccactccatctatatacactgacgcaaaaatggctgcaaacgtgtcgtgg
ccactcaaaactgatgactatttcccatacgcggatggtggagattcctactggacgggt
tactttacaagtcgtccagctctaaaaggatacatacgttcattgagtggatattatttg
gcagcaaggcaactcgagtttctggcaggaaggcaaactaaaggtcctaacactttcagt
cttggagatgctttgggaattgcacagcaccatgatgctgtgactggtactgctaaacaa
catacaacaaatgactacgaaaaacgcttagcaattggagctcttgaggctgaggctgtt
gtgacttcagctttatcacgcctaacatcaaccacaagtaattgcaccaaacccacatcc
atatttagccagtgtccgctactcaatataagctattgcccggcaacagaaaacattcct
tctacaaagagtttggtggttgttgcttataaccctcttggatggaatcgcacggatgtt
atcaagatacctgtcaaagatgttaattttgttgtgcaagacaacaatggcaatacgatt
gaagcacagttcatagagtttaataacgtaacaagcaacataagaagcttttacacagag
gcttatttgggaatttcaccccaagatgttccaaagtattggctcatatttcaagcagct
gtgctacctttgggttggaacacttacttcattaccgaaacatctgaaaaaggaggatac
gtttctgtggtagacactccacaaaacgatactatagaaattggaccaggaaacttgaaa
atgtctttctcattacagtctggacagctaaaaagagtaacaaattcaaggacaggaatc
aacttaccaatacaacaaagctatctctggtatggcagtggagctgataaccagccttct
ggtgcctacatatttcaccccgatggagcacccccggtcattgtttcaagatcagtaccg
ataaaagtcattcgtggaccacttgttgatgaagttcaccagcaattcaacccgtggatt
tatcaggtgaccagactttacaaagagaaagagcatgctgaatttgagttcatcattggt
ccgattcctacggatgatggtgttgggaaagaagtcattacaagaattacagcggatatg
gctacaaataaggtgttttatactgattctaacggaagggacttcctcaaaagggtacga
gactatagagaagactggcctcttcaagtcacacaacctgtagctgggaattattatcca
ctcaatcttggaatgttcacaacagatagcaaaactgagttgtcaatccttgttgatcgt
gccactggtggagctagcatcaaggatggacaaatggagattatgtttcaccggcgcatg
ctgtatgatgatggtagaggagtcggtgaagcccttgacgagactgtgtgtaataagacc
acgtgtcaaggacttgcgattcaaggaaattattatatgagtgttgaccacattggtagc
ggatcacgatggcgccgaacaacgggccaagagatttattcaccccttctcttagctttt
acacatgagaaacaagaagattataaagcttctcactcaacgagatcaacaacaatggat
ccaaactacagtttaccccttaacgttgcattacttacacttcaggaattggatgacgga
tgtgtgctcttacgtctagcccatctctatgaggctggtgaagacgttgattattcgacc
ttaactaaagttgaattaaagaagttgttttcttctaaaacgatcaagacaataaacgaa
acaagtttatctgcaaaccaagataagtcagcgatgaagaggacgccatggaaagttgaa
ggtggaaaagggagtgaatcggcaatagttagaggtgcacctgttgacccttccgctctt
attgtcgagctaggtcctatggagattcggacttttattttgaaattttga
DBGET
integrated database retrieval system
