KEGG   Erigeron canadensis (horseweed): 122578315
Entry
122578315         CDS       T07610                                 
Name
(RefSeq) ras-related protein Rab7 isoform X1
  KO
K07897  Ras-related protein Rab-7A
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad04144  Endocytosis
ecad04145  Phagosome
ecad04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    122578315
   04145 Phagosome
    122578315
   04148 Efferocytosis
    122578315
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ecad04131]
    122578315
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ecad04147]
    122578315
   04031 GTP-binding proteins [BR:ecad04031]
    122578315
Membrane trafficking [BR:ecad04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    122578315
Exosome [BR:ecad04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   122578315
  Exosomal proteins of other body fluids (saliva and urine)
   122578315
  Exosomal proteins of colorectal cancer cells
   122578315
  Exosomal proteins of bladder cancer cells
   122578315
GTP-binding proteins [BR:ecad04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    122578315
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA cobW RsgA_GTPase ATP_bind_1 AAA_16 Septin nSTAND3 AAA_7 AAA_22 AAA_24 PduV-EutP Sigma54_activat NACHT DAP3 nSTAND1 NTPase_1 NB-ARC
Other DBs
NCBI-GeneID: 122578315
NCBI-ProteinID: XP_043606183
LinkDB
Position
8:27849372..27856987
AA seq 228 aa
MSLRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMRSFDTLDNWHEEFLKQANPPDPSTFPF
ILLGNKIDIDGGNSRVVSEKKAREWCAAKGNIPYFETSAKEDLNVDPAFLSIARTAMANE
HEQDIYIFKGCLRLYKKQSNAVVVHVNMLNIQKHLSHSRLLLILPTRC
NT seq 687 nt   +upstreamnt  +downstreamnt
atgtctttgagaagaagaactttacttaaggtcatcgtccttggtgacagcggggttggt
aagacgtcattgatgaatcaatatgtacataagaagtttagtcagcagtataaagctaca
attggagctgattttgtcaccaaagaattgcaaatagatgataggcttgtcactttacaa
atatgggatactgccgggcaggagaggtttcaaagtctaggtgttgcgttttatcgtgga
gcagattgttgtgttctagtgtatgatgtaaatgtgatgcgatcttttgatactcttgac
aattggcacgaggaatttctcaagcaggcaaaccctccagacccaagcacttttcctttc
atacttcttggtaacaagatagatatagatggtggaaatagccgtgttgtttctgagaag
aaggcaagggaatggtgtgctgcgaaggggaatataccttactttgagacatctgcaaag
gaagaccttaatgtagatcctgcatttttgtctattgccagaactgcaatggctaatgag
catgagcaggatatatatattttcaaggggtgcctgaggctgtacaagaaacagagcaac
gcggtggttgtgcatgttaatatgctgaatatacagaagcatttatctcactctcgtttg
ttgcttattctacctactcgttgctga

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