Erigeron canadensis (horseweed): 122578382
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Entry
122578382 CDS
T07610
Name
(RefSeq) arabinosyltransferase RRA3
KO
K20783
arabinosyltransferase [EC:2.4.2.-]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00514
Other types of O-glycan biosynthesis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
122578382
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ecad01003
]
122578382
Glycosyltransferases [BR:
ecad01003
]
Glycan extension
O-Glycan
122578382
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nucleotid_trans
MapZ_EC1
Tropomyosin
ATG16
PUMA_CC
Leu_zip
SHE3
Ax_dynein_light
ZapB
ADIP
FlaC_arch
SlyX
TM7S3_TM198
YscO
CSN5_C
ACBP4_C
DUF3450
Med16_N
FlaX
TMF_DNA_bd
DUF4407
Herpes_UL6
Spc24
HALZ
YabA
Uso1_p115_C
Motif
Other DBs
NCBI-GeneID:
122578382
NCBI-ProteinID:
XP_043606266
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Position
8:complement(30703120..30706122)
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AA seq
433 aa
AA seq
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MAGPINRRSSQSVRGSRIIVAILVGILVGCLFAVFYPNGFFNSNSATSSTLRNRRLSKSD
HQSGSTLCESTERVNMLKSEITDLSNSNDELKKQVRDLTQKLQAAEQKNGQAEQQIVVAG
EPQKAGPFGTVKGIRTNPAVLPDESVNPRLAKILEKVAVKKEVIVALANSNVKAMLEVSV
ASIKKAGIPNYLVVALDDGIVDFCKENDVAYYMRDPDEGIDSVAKTGGNHAVSGLKFRIL
REFLQLGYGVLLSDVDIVYIQNPFDHIYRDSDVESMSDGHDNMTAYGYNDVFDEPAMGWA
RYAHTMRIWVYNSGFFYLRPTLPAIELLDRVADRLSHPPPAWDQAVFNEELFFPSHPGYI
GLHASKRTMDRYLFMNSKALFKEVRKDANLKKLKPVIVHVNYHPDKLPRMKAVVEFYFNG
KQDALEPFPDGSG
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcccaataaatcggagatcttcacaatcagtacgaggatccagaatcatcgta
gcaattcttgttggtatccttgttggttgcctctttgctgttttctatccaaatggcttc
tttaattcaaattctgccacttcttctactctccgcaatcgccgtctctccaaatccgac
catcagagtggatcaactttgtgtgaatcaacagagcgagttaacatgttgaaatcagag
attacagatttatcaaactcaaatgatgaactaaagaagcaagttcgggatttaactcaa
aaattacaggcagccgaacagaaaaatggtcaagccgagcaacaaattgtggtggcaggc
gagccacaaaaggccggaccttttgggaccgtcaagggtattagaactaacccggctgtt
cttccagatgagtccgttaacccaagactggcaaaaatcttggaaaaagttgcagtgaag
aaggaggttatagttgctcttgcaaattctaatgtaaaagccatgttggaggtgtcggtt
gccagcatcaagaaagcaggcatacctaattatctagttgtggctttagatgacgggatt
gtggatttttgcaaagaaaatgatgtagcgtactacatgcgggatccagatgagggtatt
gattctgttgctaaaacgggaggtaatcatgctgtttcaggattaaaatttagaatcttg
agggagtttttgcagttgggttatggtgtattgttgtctgatgtggatatagtgtatata
caaaacccatttgatcatatatacagggattcagatgtggaatctatgtctgatggacat
gataacatgactgcttatggatataatgacgtgtttgatgagcctgctatgggttgggct
cgatatgctcatactatgcggatatgggtttataattcagggtttttctatttgcgtccc
actttgcctgcaatcgagttgttggatcgtgtggctgacaggctctctcatccgccacct
gcttgggatcaagcagttttcaatgaagaactgttctttccttctcatcctggctatatt
ggtctccatgcttctaagagaactatggatcgctatctatttatgaatagtaaagccctt
ttcaaggaagtaaggaaagatgctaatttgaagaagttaaagcctgtgattgttcatgtt
aattaccacccagataaattaccgagaatgaaagcagttgtcgagttttatttcaatggc
aagcaagatgcgttggaaccgtttcctgatggttctggttga
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