Erigeron canadensis (horseweed): 122578410
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Entry
122578410 CDS
T07610
Name
(RefSeq) cyclin-T1-3-like
KO
K15188
cyclin T
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
122578410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecad03021
]
122578410
Transcription machinery [BR:
ecad03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
122578410
Brd4/P-TEFb complex
122578410
7SK RNP complex
122578410
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cyclin_N
CycT2-like_C
TFIIB
Cyclin_C
DUF6387
Motif
Other DBs
NCBI-GeneID:
122578410
NCBI-ProteinID:
XP_043606299
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All DBs
Position
8:complement(31077794..31083716)
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AA seq
444 aa
AA seq
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MAVSMHCHISRKEMARDVGGMVMPEAPQDLTRKWYFTKDELECHTPSRADGIDYEQEESL
RKLYCSFLQELGMELKVPQVTIATALMFCHRFYMRQSHGKNDWQTVATACMFLACKAEET
PQWLGELVVMAYKLIHKGDPSASRRIREIYDKQKELILIGERLLLHTIAFDLNIEHPYKS
LVRALKRLNITHKELVKVAWNFVNDSLHSSLCLQHKPHYIAAGSLYLASKVKNVILATAN
DKAWWMEFDVAPKQLKGVIEQMKIMWEEIRSQNQIRTPKDQNIIKSQTTKVPIHSPQSST
LSGSSIVHDSKAMPSKAAGEPARPLTSNIVKKQGFEKVYDTSKETLKCQTSDTGSAVSVV
EDGDSGEPVTVSDLSSICKVVLAEVVVDVNRIREKLKKRNSAETMKRKRIEDMGNEVDGE
DWIERELENGIVLESSYSKKQAKT
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggcagtttcaatgcattgccatatctctagaaaggaaatggcaagagatgtaggtggg
atggtaatgcctgaagcacctcaggatcttactcgtaagtggtatttcaccaaagatgaa
ctagagtgccatactccatcaagggctgatggcattgactacgagcaggaggaaagtctg
cgaaaactatactgctctttcctgcaagagcttggaatggagcttaaagtaccccaggta
acaatagcaacagcactaatgttctgccaccgattttacatgcggcagtcccatgggaag
aatgactggcagacagttgctactgcatgcatgtttcttgcttgcaaagctgaagaaaca
ccacaatggctaggtgaacttgttgtgatggcttataagttaatacacaagggggatcct
tcagcttcgcggagaattcgggagatatatgataagcaaaaggaactaattttaattggg
gaaaggcttctattgcatactattgcgtttgatctgaatattgaacatccttacaagtca
cttgttcgtgcccttaagagactgaatattacacacaaagagcttgtaaaagtagcgtgg
aactttgtgaatgactcgctccatagctcattgtgcttgcagcacaaaccacattatatt
gctgccggctcactgtatcttgcttctaaagtaaagaatgtaatattggcaacagcaaat
gataaagcttggtggatggagtttgatgttgcacccaagcagttgaaaggtgtcatcgaa
cagatgaagattatgtgggaagagattcgaagtcagaatcaaatccgaacaccaaaagat
caaaacattataaaatctcaaaccaccaaagtgccaattcatagtccacaatcctccact
ctgagtggctccagtatcgttcatgattctaaagcaatgccttccaaggctgctggtgaa
cctgcaagacccctaacgtctaatattgtaaagaaacagggctttgaaaaagtctatgat
acttccaaagaaacattaaaatgccaaaccagtgataccgggagtgcagttagcgttgtc
gaagatggtgatagcggtgaacctgttactgtgtctgatctaagttcaatttgcaaggta
gttctggcggaggttgtagttgatgtaaatcgaattagagaaaagcttaagaaaaggaat
tctgcagaaactatgaaaagaaagcgtattgaagacatgggcaatgaagttgacggtgaa
gactggatagagagagaattggagaatggcatagtgttggaatcttcttattctaaaaag
caagcgaagacctga
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