KEGG   Erigeron canadensis (horseweed): 122578410
Entry
122578410         CDS       T07610                                 
Name
(RefSeq) cyclin-T1-3-like
  KO
K15188  cyclin T
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    122578410
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ecad03021]
    122578410
Transcription machinery [BR:ecad03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     122578410
    Brd4/P-TEFb complex
     122578410
    7SK RNP complex
     122578410
SSDB
Motif
Pfam: Cyclin_N CycT2-like_C TFIIB Cyclin_C DUF6387
Other DBs
NCBI-GeneID: 122578410
NCBI-ProteinID: XP_043606299
LinkDB
Position
8:complement(31077794..31083716)
AA seq 444 aa
MAVSMHCHISRKEMARDVGGMVMPEAPQDLTRKWYFTKDELECHTPSRADGIDYEQEESL
RKLYCSFLQELGMELKVPQVTIATALMFCHRFYMRQSHGKNDWQTVATACMFLACKAEET
PQWLGELVVMAYKLIHKGDPSASRRIREIYDKQKELILIGERLLLHTIAFDLNIEHPYKS
LVRALKRLNITHKELVKVAWNFVNDSLHSSLCLQHKPHYIAAGSLYLASKVKNVILATAN
DKAWWMEFDVAPKQLKGVIEQMKIMWEEIRSQNQIRTPKDQNIIKSQTTKVPIHSPQSST
LSGSSIVHDSKAMPSKAAGEPARPLTSNIVKKQGFEKVYDTSKETLKCQTSDTGSAVSVV
EDGDSGEPVTVSDLSSICKVVLAEVVVDVNRIREKLKKRNSAETMKRKRIEDMGNEVDGE
DWIERELENGIVLESSYSKKQAKT
NT seq 1335 nt   +upstreamnt  +downstreamnt
atggcagtttcaatgcattgccatatctctagaaaggaaatggcaagagatgtaggtggg
atggtaatgcctgaagcacctcaggatcttactcgtaagtggtatttcaccaaagatgaa
ctagagtgccatactccatcaagggctgatggcattgactacgagcaggaggaaagtctg
cgaaaactatactgctctttcctgcaagagcttggaatggagcttaaagtaccccaggta
acaatagcaacagcactaatgttctgccaccgattttacatgcggcagtcccatgggaag
aatgactggcagacagttgctactgcatgcatgtttcttgcttgcaaagctgaagaaaca
ccacaatggctaggtgaacttgttgtgatggcttataagttaatacacaagggggatcct
tcagcttcgcggagaattcgggagatatatgataagcaaaaggaactaattttaattggg
gaaaggcttctattgcatactattgcgtttgatctgaatattgaacatccttacaagtca
cttgttcgtgcccttaagagactgaatattacacacaaagagcttgtaaaagtagcgtgg
aactttgtgaatgactcgctccatagctcattgtgcttgcagcacaaaccacattatatt
gctgccggctcactgtatcttgcttctaaagtaaagaatgtaatattggcaacagcaaat
gataaagcttggtggatggagtttgatgttgcacccaagcagttgaaaggtgtcatcgaa
cagatgaagattatgtgggaagagattcgaagtcagaatcaaatccgaacaccaaaagat
caaaacattataaaatctcaaaccaccaaagtgccaattcatagtccacaatcctccact
ctgagtggctccagtatcgttcatgattctaaagcaatgccttccaaggctgctggtgaa
cctgcaagacccctaacgtctaatattgtaaagaaacagggctttgaaaaagtctatgat
acttccaaagaaacattaaaatgccaaaccagtgataccgggagtgcagttagcgttgtc
gaagatggtgatagcggtgaacctgttactgtgtctgatctaagttcaatttgcaaggta
gttctggcggaggttgtagttgatgtaaatcgaattagagaaaagcttaagaaaaggaat
tctgcagaaactatgaaaagaaagcgtattgaagacatgggcaatgaagttgacggtgaa
gactggatagagagagaattggagaatggcatagtgttggaatcttcttattctaaaaag
caagcgaagacctga

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