Erigeron canadensis (horseweed): 122578446
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Entry
122578446 CDS
T07610
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00900
Terpenoid backbone biosynthesis
ecad01100
Metabolic pathways
ecad01110
Biosynthesis of secondary metabolites
Module
ecad_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
122578446
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ecad01006
]
122578446
Enzymes [BR:
ecad01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
122578446
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
122578446
2.5.1.29 geranylgeranyl diphosphate synthase
122578446
Prenyltransferases [BR:
ecad01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
122578446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
KwaB
VGPC1_C
Motif
Other DBs
NCBI-GeneID:
122578446
NCBI-ProteinID:
XP_043606349
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All DBs
Position
8:complement(6495795..6497171)
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AA seq
363 aa
AA seq
DB search
MSLANPTNLFYGAPTRSNRTSLYPTRKGQPIFPTRSSSSSFTTISSVLTKQQQQSNPPEN
KFEKTHFETPFDFNSYMIEKANSVNKALNDAVPLRNPTKIHESMRYSLLAGGKRVRPMLC
IAACELVGGTEATAMPAACAVEMIHTMSLMHDDLPCMDNDDFRRGKPTNHIVYGEEIAIL
SGDALLSFSFEHIATATQGVSIDRVLRSIAELAKCVGSEGLVAGQVVDICSEGQDVGLDQ
LEFIHLHKTAALLEASVVIGAVLGGGTDQEVEKLRKFARSIGLLFQVVDDILDVTKSSEE
LGKTAGKDLLTDKTTYPKLLGLEKSREFAERLNKEAKEQLVEFDQRKAQPLIALANYIAY
REN
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttgcaaatcccacaaatttgttctatggagcccccaccagatctaacagaacc
tcactttacccgacccgaaaaggtcaacccattttcccaacccgttcatcttcctcttca
ttcactacaatctcttcagttttaaccaaacaacaacaacaatcaaatccaccagaaaac
aagttcgaaaaaacccatttcgaaacaccattcgatttcaattcttacatgatagaaaag
gcaaattcggtaaacaaagccttaaacgacgccgttccgttaagaaacccgacaaaaatc
cacgaatccatgcggtattcattactcgcaggtgggaaacgtgttagaccaatgttatgt
attgcagcctgcgaacttgtcggaggaaccgaggcaaccgcgatgcctgccgcatgtgct
gtcgaaatgattcacactatgtctttaatgcatgatgatcttccgtgtatggataacgac
gattttcgtcgcggaaaaccaacaaatcatattgtgtacggtgaagaaatcgcgatttta
agcggagatgctttgttgtcattttcattcgaacatatagcaacagcgacacaaggtgta
tctatagaccgagtccttcggtctatagctgagttagctaaatgtgtcgggtcggaaggg
ttggttgcgggtcaagtagtggatatatgttctgaaggacaagatgtcgggttagaccaa
ttggagtttattcatttgcacaaaaccgcggctttacttgaagcctcggtggttattggt
gcggttttgggaggtggtacggatcaagaagttgaaaagttgagaaaattcgcgaggtcg
attgggttattgtttcaagtggttgatgatattcttgacgtgacaaaatcttcggaagaa
ttggggaaaaccgcgggtaaagatttgttgacggataaaactacgtatcctaagttgtta
ggactagaaaaatcgagggagtttgctgagagattgaataaggaagcgaaagaacagttg
gttgagtttgatcaacggaaggcacagccgttgattgcacttgctaattatattgcatat
agggaaaattga
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