Erigeron canadensis (horseweed): 122578460
Help
Entry
122578460 CDS
T07610
Name
(RefSeq) long chain base biosynthesis protein 2a-like
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00600
Sphingolipid metabolism
ecad01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
122578460
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ecad01007
]
122578460
Enzymes [BR:
ecad01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
122578460
Amino acid related enzymes [BR:
ecad01007
]
Aminotransferase (transaminase)
Class II
122578460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
OKR_DC_1
Motif
Other DBs
NCBI-GeneID:
122578460
NCBI-ProteinID:
XP_043606366
LinkDB
All DBs
Position
8:34532976..34539465
Genome browser
AA seq
489 aa
AA seq
DB search
MITIPYITALTTYFSYGLLFAFGQLRDFFRNLVDWWKDNNLQGYAPICLGLEDFYIRRLY
LRIQDCFGRPISSPPDAWFDAVERVSSDNNKTLKRTKNVRRCLNLGSYNYLGFAAADEYC
TPLVTQSLKKYFASTCSSRVDGGTTALHAELEEVVANFVGKPAALVTGMGYVTNSAILPV
LIGKGGLIVSDSLNHNSIVNGARGSGATITVFRHNMPSHLEEVLRERIADGQPRTHRPWK
KILVVVEGIYSMEGEICKLPEIVAICKKYKAYVYLDEAHSIGAIGKTGRGVCELLGVDTA
DVDIMMGTFTKSFGSCGGYIAGSKEIIQYLKYNCPAHLYATSISPPAAQQIISSIKVILG
EDGSSRGALKLAQIRENSNYCRSELQKMGFEVLGENDSPIMPIMIYNPAKIPAFSRECLK
RNVAVVVVGFPATPLLLGRARICISAAHSREDIVKALEVISEVGDLVGIKYFPAEPKKPQ
LEEGRVKTE
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgatcacaattccttatataaccgccttaacaacctacttcagctacggtttacttttc
gcttttggtcaattacgtgatttctttcgtaatctcgttgattggtggaaagataacaat
cttcagggttatgcaccgatctgcttaggtcttgaagatttttatattcgtcgattatat
cttcgtattcaggattgttttggacgacctatctcgagccctccagatgcttggtttgat
gcggtggaacgtgtttctagtgataataacaagacactcaagcggactaaaaatgtacgc
aggtgtcttaacttaggatcgtataactaccttggatttgctgcagcagatgaatactgc
acgccccttgtaactcagtctttaaaaaaatactttgccagcacatgcagtagccgtgtt
gatggaggcactacagcactgcatgccgaattagaggaggtggttgctaattttgttggg
aagccagccgctttggttactggcatgggttatgtcaccaactctgctatccttcctgtc
ttgattggaaaaggagggttaatagttagtgattctttgaaccataactccatagtaaac
ggtgctcgagggtcgggtgctactattactgtgtttcgacataatatgccgtcccatttg
gaagaggtattgagagaacgtattgctgatgggcaaccaagaacacataggccttggaag
aaaattcttgtcgttgtagaggggatatacagcatggaaggggaaatttgcaagcttcct
gagattgttgctatctgtaagaaatacaaggcatatgtgtatttggatgaggctcacagt
atcggagccattgggaaaacaggaagaggtgtgtgtgagcttttaggcgtggatactgct
gatgtggatattatgatgggaactttcacaaaatcattcggatcatgtggtggttatata
gcaggatcaaaggaaattattcaatacttaaaatataattgtccagctcatctatatgcc
acgtctatatcacctcctgctgctcagcaaattatatcttcaataaaggttattcttgga
gaggatggctctagtcgaggtgctctgaagcttgctcaaattcgtgagaacagtaactat
tgtagatcagaactgcagaaaatgggctttgaggttctaggggaaaatgactcaccgatt
atgcccataatgatttataatcccgcaaaaatccctgccttttcaagggaatgtctcaaa
cggaatgtagcggttgttgttgtcggtttcccagccactcctctactgttgggtagagca
cgtatatgcatttccgctgctcattcacgcgaagacatcgttaaagctttagaggttata
agtgaagttggcgacttggtcggcattaaatacttccctgctgaacccaagaagccacaa
cttgaagaaggcagagttaaaacagagtag
DBGET
integrated database retrieval system
