KEGG   Erigeron canadensis (horseweed): 122578461
Entry
122578461         CDS       T07610                                 
Name
(RefSeq) cyclin-T1-3-like
  KO
K15188  cyclin T
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    122578461
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ecad03021]
    122578461
Transcription machinery [BR:ecad03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     122578461
    Brd4/P-TEFb complex
     122578461
    7SK RNP complex
     122578461
SSDB
Motif
Pfam: Cyclin_N CycT2-like_C Cyclin_C TFIIB Cyclin_C_2
Other DBs
NCBI-GeneID: 122578461
NCBI-ProteinID: XP_043606367
LinkDB
Position
8:complement(46652558..46660029)
AA seq 540 aa
MAALLSSDPMHFGMYEGGPYRPADDKVEENGGRWYFSRKEIEENSPSRPDGIDLKKETYL
RKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHAKNDRRTVATVCMFLAGKVEET
PRPLKDVILVSYEINHKKDEEAIQRIKQKEVYEKQKELILLGERVVLATLGFDFNVHHPY
KPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPS
DGEKVWWQEFDVTPRQLEEVSNQMLELYEQNKMAPSQTSEVVDGAGGGVTQKGPTRPVSA
DEDGTNNSNSKPSTSNLASSRPPADQSYPDNHSGPSRASQNRSNDYGNTDAKGDTEVNES
QQRYRPDDGNGSEGHGEEVRERREPGEVKEKHIGRNLDYKGQSPQDAIKRIDKDKVKAAL
EKRRKSRGGDVTRRTDFMDDDDLIERELEDGIELAAESEKSKQDKKHNWSKPSNAVDEDL
EDGQYHSSSKAHTSRSQDIDLVEEGEVGMLDDGERGYRSPKFSNRKRKGGGTPPEKRRKN
NT seq 1623 nt   +upstreamnt  +downstreamnt
atggctgctttgttgtccagtgatcctatgcattttggcatgtatgaaggtggtccatat
aggcctgccgatgataaagtagaagaaaatggtggccggtggtatttttctcgcaaagaa
attgaagagaactctccatcaaggccagatggcattgatttgaagaaggagacttatcta
cgcaaatcgtattgcacatttttgcaagacttgggtatgaggctcaaagtgccccaggta
acaattgctactgctataatcttttgtcaccgtttttttctccgtcaatcgcatgcaaag
aatgacaggaggacggttgccactgtctgcatgtttcttgcaggcaaggttgaagaaact
cctcgtccgttgaaggatgttatccttgtttcctacgaaatcaatcacaaaaaggatgaa
gaggcaattcaaagaatcaaacagaaggaagtatacgaaaaacaaaaggagttaattcta
cttggagaacgggtcgttcttgcgactcttgggtttgattttaatgtgcatcatccatac
aaaccgctagtcgaggcaataaagaagttcaaggttgcccaaaatgcccttgctcaagtt
gcatggaattttgtgaacgatgggcttcggacatctctctgcttgcaatttaagcctcat
catattgcggccggggctatttttcttgccgccaagttcctcaaagttaagctcccttct
gacggtgagaaagtttggtggcaggagtttgatgtcaccccacgacaattggaggaggtc
agtaaccaaatgttagaattgtatgagcaaaataaaatggcaccttctcaaactagtgaa
gtcgtcgacggtgcaggtggtggggttactcagaagggccctacacgacctgtttctgct
gatgaagatggtacaaacaacagtaattccaaaccgagtacctcaaaccttgcatcatcg
aggcccccagctgatcagtcgtatccagataatcatagtggcccatcaagagcgtctcaa
aacagaagtaatgactatggaaacacagacgcaaagggagacactgaagtcaatgaaagt
caacagcgttataggccagatgatggtaatggttctgaaggacatggcgaggaagttcga
gaaagaagggaaccaggggaagtaaaggagaaacacattggacggaatctggattacaaa
gggcaatcacctcaagatgctataaaaaggattgataaagacaaggttaaagcagctctt
gagaaacgaaggaagagccgtggtggtgatgtaacccgaagaacagattttatggatgat
gatgatttaattgagagagagttagaagatggtatagagttggcagctgaatcagagaaa
agcaagcaagataaaaaacataattggtctaaaccatcaaatgcggtggatgaggatctt
gaagatggtcaatatcattcttcatcaaaagcacatacatcacgaagtcaagatattgac
ctcgtggaagaaggggaggtggggatgttggatgatggagagagggggtataggtcacca
aagtttagtaatcggaaaaggaagggtggaggaaccccgcctgaaaaacggaggaaaaac
tag

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