Erigeron canadensis (horseweed): 122578619
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Entry
122578619 CDS
T07610
Name
(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD2-like isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122578619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122578619
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecad04147
]
122578619
Membrane trafficking [BR:
ecad04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
122578619
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
122578619
Exosome [BR:
ecad04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122578619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
BAR
PH
Ank
Ank_2
Ank_3
Ank_4
PH_8
PH_11
ANK_LRRK2
BAR_2
PH_13
Ank_5
PH_20
PH_alsin
GH85_C
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
122578619
NCBI-ProteinID:
XP_043606550
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All DBs
Position
8:43392110..43400439
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AA seq
805 aa
AA seq
DB search
MTLPRSASVPVGEERKRGIYSDYPDLARFLPPDLADPMTAFIKLDDSPMFQKQVRYLEQT
TDELKVRCQKLHKGSKKYMDGLGEACNMDYIFADSLEAFGGGQDDPVSVSIGGPIMSKFV
SAFREIETFKELLRSQVEHLLVDRLAQFLADDLQDTKDSRKRFDKATYAYDQAREKVASL
KRSTRDEVVAELEEDLQNQKSAFERSRFNLVHSLMNIEAKKKYTFLESLSAIMDAHLRYF
KLGYELLSQMEPFIHQVLTYAQQSKEQASIEQDRLAKRIQEFRTHTEMKEAVPSNMGRVN
GVGMSSDKNIEAIMQSTTKGTVQTIKQGYLLKRSSSLRADWKRRFFVLDSRGNLYYHRIL
PNKPVGAQSTNSLQSAEHHSRVFGRFRARHSRASSHDEENLECHTVDLRTSTIKVDAEDS
DLRLCFRIISPSKTYTLQAENEGDRIDWMNKITGVIASLLNSHLKQPHFNRSNMGSTLDT
VGEDYAVSQVDEMGSIFDNININQADCVANILREIPGNDLCAECGATEPDWASLNLGILM
CIECSGVHRNLGVHISKVRSISLDVKVWEPTVMDLFQNLGNSYCNSIWESLLETSSEDAS
SFNKPTPRDAFQQREKYIIAKYVEKQLISQEETSTTTPSHATRIWEAVKNNDIREVYRLI
ATSSTNIVNTTYNEVAGADLFHALHDHAATEKNDPLNCKNMKDSSKPESCLEGCTLLHLA
CNSGFQVMMELLLQSGADINKPDYHGRTPLHHCIFSSNNKLAKYMLRRGAIASIKDGGGR
VALERAMEMGAITDDELLILLSEGK
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgacattgccgcgatctgcatctgtacctgtaggtgaagaacggaaaagaggaatctat
tcggactatccagatttagcccggttcttaccgcccgatttagctgacccgatgactgct
tttatcaaactcgatgattcccctatgttccagaaacaggtgcgttatcttgaacaaaca
acggatgagctaaaagttcgatgtcagaaactacacaaagggagcaaaaagtatatggac
ggtctaggagaagcatgcaatatggactatatttttgcagactcgttagaggcgtttggt
ggcggccaagatgatccagttagtgtatctattggaggtcctataatgtcgaagtttgta
tctgcttttcgagaaattgaaacttttaaggagcttcttcggtcccaagttgaacatttg
cttgttgatcgtttagctcagtttttggccgatgatcttcaagacacaaaggactcacgt
aaacgatttgataaagctacatatgcatatgatcaggctcgtgaaaaggttgcatcgttg
aaaaggagcacacgagacgaagttgttgctgaactagaggaggacttgcaaaaccaaaaa
tctgcatttgagaggagcagatttaatctagtacattctctcatgaatatagaggcaaaa
aagaaatacacatttttggaatctcttagtgcaataatggatgcacatttgagatatttc
aagctgggctatgaattgttgagtcaaatggagcctttcattcatcaggtgttgacatat
gcccaacaatctaaggagcaggcaagtattgaacaagatagacttgcaaagagaattcaa
gagtttaggacacacacagaaatgaaggaggcagtgcctagtaacatggggcgtgttaat
ggtgttggaatgagctctgataaaaatatagaagcaataatgcagtccactacaaaagga
acagtccagaccatcaagcaagggtatcttttaaaacgatcttcaagtttgagagcagat
tggaagaggcgattctttgtacttgatagccgcgggaacttatattatcaccggattctg
cccaacaaacctgtgggtgcacaatcaacaaattcacttcaatctgctgaacaccatagt
cgtgtatttggaaggtttcgagcaagacatagcagggcatcatcacacgatgaggaaaac
ttggaatgtcatactgtagaccttcgtacttcgacaataaaagttgatgctgaggattca
gatttgcgtttgtgcttcaggataatttcaccctcgaaaacttacacattgcaggctgaa
aatgaaggtgataggattgactggatgaacaagatcacaggagtgattgcttctctcttg
aactcccacttgaaacagccacatttcaacagaagtaatatgggaagtacccttgataca
gttggtgaagattatgctgtttcacaagtcgatgaaatgggatctatattcgataacata
aatatcaatcaagcagattgtgttgctaacattcttcgggagatccctggaaatgatcta
tgtgcagaatgtggtgcaactgaacctgattgggcatctcttaatttaggcatattaatg
tgcattgaatgttccggtgtacatcggaatctaggggttcacatatcgaaggttagatca
attagtcttgatgttaaagtttgggaacctactgtaatggatttgtttcagaatttgggt
aattcatactgcaattccatatgggaaagtttacttgaaactagtagtgaggatgcatcg
agttttaataaacctactccaagggatgcatttcaacagagggagaagtatatcattgca
aagtatgtggagaagcaattaatctctcaagaagaaacctctactaccaccccctcccat
gccactaggatatgggaagcagttaagaataacgatatacgggaagtatatcgtctaatt
gctacgtcaagtaccaatatagtcaataccacatataacgaggtggctggtgctgatctg
tttcacgctcttcacgaccatgctgctaccgaaaaaaacgatccattaaactgtaaaaat
atgaaggattctagtaagccggaaagttgtctagaagggtgtacattattgcatctagca
tgtaattctggctttcaggtgatgatggaattactgttacagagtggtgctgatataaac
aagcctgactaccatggtaggacaccacttcaccactgtatcttctccagcaacaacaaa
ttagccaagtatatgctcagaagaggggcgattgcatcaatcaaagacgggggagggcga
gttgccctagaacgagcaatggaaatgggagcaatcactgatgatgagttattaatcttg
ctatcggagggcaagtga
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