Erigeron canadensis (horseweed): 122578743
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Entry
122578743 CDS
T07610
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122578743
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ecad01009
]
122578743
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122578743
03036 Chromosome and associated proteins [BR:
ecad03036
]
122578743
Protein phosphatases and associated proteins [BR:
ecad01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
122578743
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
122578743
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
122578743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_EML_2
PGP_phosphatase
Ribosomal_L4
Motif
Other DBs
NCBI-GeneID:
122578743
NCBI-ProteinID:
XP_043606705
LinkDB
All DBs
Position
8:33550061..33555836
Genome browser
AA seq
507 aa
AA seq
DB search
MSLTGGSPLDWKFSQVFGERTPGEDVQNIDVISAIEFDKSGDYLAVGDRGGRLVIFENKA
GGKDVTSKQHSHKELETSDVSVMRHPEYRYKTEFQSHEPEFDYLKSVEIEEKINKMKWCT
TLNGALFILSTNDKTIKLWKVKERKLKKVKEMDLSPYVSSENSLLSESSFVSGESKPSVS
NGHRLEWIDSMGTSNSPSNAGYVNGQNIGDTALARCRKMYAHAHDYNINSISNNSDGQTF
ISADDLRINLWNLEVSNQCFNIIDTKPSNMDDLTEVITSAEFHLLHCNLLAYSSSRGFIR
LVDLRQSALCDRSSMMLQDAEPRGQKTFFSEIVASTSSIKFSADGRHILSRDYMNLKLWD
MRMATSPVVTYKIHEHLRPKLSDLYNNDAIFDKFDCCISGDGSHFATGSYSNHMRIFSNG
SGSTEGTTVEASRNSYRKRPQQATSRARRTSLSNLTRGFYRQGNDASGTGTNEFSCDINS
KLLHLAWHPKTNLIACSTGNSLFMYYA
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcaccggcggctcccctcttgactggaagttttctcaggttttcggtgaacgt
actcctggagaagatgtccaaaacattgatgtaatatctgcaattgaatttgacaagagt
ggtgattatcttgcggttggtgatcgaggaggccgtcttgtaatttttgaaaacaaggct
ggcggtaaagatgtaacaagcaagcaacattctcataaggagttggaaacatcagatgtt
tctgtaatgcggcatcctgagtatagatacaagacggaattccaaagtcatgagccggag
tttgattatctaaaaagtgtggaaattgaagagaagattaacaagatgaaatggtgcacg
accttgaatggggcactctttatactttcaacaaacgacaaaaccatcaaactttggaag
gttaaggaacgaaaactgaagaaagtaaaggaaatggacctaagtccatatgtttcttct
gagaattctctactgtctgaaagcagttttgtcagcggggaatctaaaccgtcagtttct
aatggtcatcgtctagaatggatagatagtatgggaacaagtaactcaccttcaaatgca
ggatatgtaaatgggcaaaatattggggatactgctcttgcaagatgtcggaagatgtat
gcacatgctcatgattataacatcaactctatctctaataatagtgatggtcagacgttt
atttctgcggatgaccttcggataaacttatggaaccttgaggtcagtaatcaatgcttc
aatatcattgacacgaagccatcaaacatggatgatctcacagaggtgataacatcagct
gagttccatttactgcattgtaatttgctcgcttatagcagctcaaggggttttattcgg
ctagtagacttgagacaatcagcattatgtgatcgcagttctatgatgttgcaggatgct
gagccccgggggcagaaaacttttttttcagaaattgtagcatcaacttctagtataaag
ttctcagcagatggaaggcatatcttaagtcgtgactacatgaatttaaagctgtgggat
atgcgtatggcgacatcgccagttgtgacatataaaattcatgagcatcttcgcccaaag
ctaagtgacttgtataacaatgacgccatatttgacaagttcgattgctgcattagtgga
gatggcagtcactttgcaacaggatcgtatagcaatcacatgagaatattctctaacgga
agcggaagcacagaaggaactacagtggaggctagcaggaactcttacagaaaacgacca
caacaagcaacttcaagggctagaagaacatccctgagcaacttgacccgagggttttac
cgacaaggaaatgatgcttcagggacaggaactaatgagttttcttgcgacattaattca
aagttactgcatttagcttggcacccgaaaaccaatttgattgcatgctctactggaaac
agtttgttcatgtactatgcatag
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