Erigeron canadensis (horseweed): 122578762
Help
Entry
122578762 CDS
T07610
Name
(RefSeq) protein PAT1 homolog 1-like
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122578762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122578762
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122578762
mRNA degradation factors
5'-3' decay
Decapping complex
122578762
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
122578762
NCBI-ProteinID:
XP_043606729
LinkDB
All DBs
Position
8:complement(43026695..43034996)
Genome browser
AA seq
764 aa
AA seq
DB search
MERSGDKLFDASQYAFFGQNVSEKADFGCIEVEQDNPLIGLADDEYRLFDREEESGLGSL
SEVDDLSTTFSKLNRSVSGPRHPGVIGDRGSGSGSFSRESSSASEWLQERELTEWLDQHI
TDTECYQGSRRWSSQPHLYSDSKPLYRASSYPVEQQQVLSEPVLVPDPSFPSFPPISQAN
LSSPRQHSNFMNLSSNAQLPFSEPNLSPLLNSSKLHLNRVLHGSRYSGSGSHLIPPVLSH
YSQPQNNWANHMLHVDHAGLLSNTFQQKLLHNGSLSPHFISPLQHSVGPYAPLQLCPLPS
RSLHLSSRKSKTSQKSNRQSGRLSRQGSDSSNQKSDKFQVQFKSKYMTSEEIESVLRMQH
SATHSNDPYIDDYYHQARIAKISSDSKSKTRFCPAHLKDSPFRSSRNSTESKNNVNIDAN
GRISLTFIRRPQPLLEVDPPVDGGSENQASERPLEQEPMLAARIMIEDGLYLLLDVDDID
RLLQSSQPQDGGIQIRQRRQVLLEGLATSLQLVDPLGKSLTAKDDIIFLRLVSLPKGRKL
ISKYLQLLSPSGELARIVCMAIFRHLRFLFGGLPSDPSASMTITGLAKTVTTCVGSMDLN
SLSACLAAVVCSSEQPPLRPLGSQSGDGASVVLKSVLDRATSLLSNPPVSTNSGLRNPKL
WQASFDAFFGLLTKYCLSKYDSLVQAMCTQVPPTTEIVASEAALAISREMPVELLRASLP
HTDNNQRKMLVDFSQRSMQVAGLTDPRGSIGQVNPESVLLHGAV
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggagagatctggtgataaactatttgatgcctcacagtatgcgtttttcggacaaaat
gtatcagaaaaggctgattttgggtgtatagaagttgaacaagataaccctttgattgga
cttgctgacgatgaatatcgtctgtttgatagagaagaggaatcagggctcgggtctcta
tcagaagtagatgatctgtcaactacattttcaaagttgaacagatcagttagtggacct
aggcatcctggagttattggtgaccgaggatcaggatctggatctttttcaagggaaagt
tcatctgcttccgaatggttgcaagaaagagagttgacagagtggttggaccaacatatt
actgacactgaatgctaccaaggaagcagaagatggtcatcacaacctcatctttactca
gattcaaagccattgtacagagcatcatcataccctgttgaacaacagcaggtcctcagt
gaacctgttttggtacctgacccatctttcccttccttccctcctattagtcaagcaaac
ctctcctcgccacgccagcattcaaattttatgaatctttcttccaatgcccagttaccc
ttttcggagccaaatctttcacctttattgaattccagtaagctgcatttaaatcgtgtt
cttcatggatcccgttatagtggaagtgggtcacacttaattcctcctgttctttcacat
tattctcagccacaaaataattgggccaatcatatgctacatgtggaccatgcgggccta
ttgagcaacacgtttcagcagaaattgcttcataatggatcactatcaccacattttata
tcaccacttcaacactctgttggtccttatgcaccacttcagctgtgcccactcccttcc
cgttcactacatttaagtagtcgaaaatccaaaacgagccaaaaaagcaatcggcaaagt
ggacgactttctcgtcagggctctgatagtagtaaccagaagagtgataaatttcaggta
caattcaaatcaaaatacatgacatccgaagagattgaatccgttcttaggatgcagcat
tctgcaactcacagcaatgacccatacatagacgattactatcaccaagcccgaattgct
aaaatttcttctgattcaaagtcaaaaacccgtttctgtcccgctcatcttaaagattca
ccctttagatcctcacgtaacagtacagaatcgaaaaataatgtcaatattgatgctaat
ggaaggatttcattaacattcatccgtaggccccagcctcttcttgaagtagatcctcct
gttgatggtggttctgaaaaccaagcatctgagagaccattagaacaagaaccaatgctt
gcagccagaattatgatcgaagatggcctttatcttcttcttgatgtggatgacattgat
cgtctcctacaatctagtcagcctcaagatggcggtatacaaataagacaaagaaggcag
gttcttctagaagggttagctacatcacttcagcttgttgatcctctcgggaaaagtttg
actgctaaggatgatatcatctttttacgattagtatcacttcccaaaggccgcaaactc
atatcaaaataccttcagcttctctcaccaagtggtgaacttgcacggatagtatgcatg
gcgattttccgtcacttaaggtttctatttggcggccttccttctgacccatcagcgtcc
atgaccattactggtttagcaaaaacggtcaccacatgcgttggttcaatggatcttaat
tctttgagtgcttgtcttgctgcagtagtgtgttcttcagagcagccaccattacgtcct
ctcgggagccagtccggagacggggcttcggttgttctaaaatctgttttggatcgggcc
acttcattgttaagtaaccctccagtttctaccaactctgggttgcgaaatcctaagcta
tggcaagcctccttcgatgcgttttttgggcttcttacgaaatactgcttaagcaagtat
gatagtttagtacaagctatgtgtacacaggtcccaccaaccacagaaattgttgcttca
gaggcagcacttgctatcagtagagaaatgccggttgaacttctgcgtgccagtcttcca
cacactgataataatcagaggaagatgttagttgatttttcacaaaggtccatgcaggtt
gctggtttgactgatccaagagggagcattggtcaagtgaatcctgagtcggttttgttg
catggtgcagtttga
DBGET
integrated database retrieval system
