Erigeron canadensis (horseweed): 122578910
Help
Entry
122578910 CDS
T07610
Name
(RefSeq) probable small nuclear ribonucleoprotein E
KO
K11097
small nuclear ribonucleoprotein E
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122578910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122578910
03041 Spliceosome [BR:
ecad03041
]
122578910
03032 DNA replication proteins [BR:
ecad03032
]
122578910
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
122578910
Spliceosome [BR:
ecad03041
]
Complex A
U1 snRNP components
Sm proteins
122578910
U2 snRNP components
122578910
Complex B
U1 snRNP components
122578910
U4/U6.U5 tri-snRNP components
122578910
Complex C
U2 snRNP components
122578910
DNA replication proteins [BR:
ecad03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
122578910
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
122578910
NCBI-ProteinID:
XP_043606896
LinkDB
All DBs
Position
8:1659806..1668005
Genome browser
AA seq
81 aa
AA seq
DB search
MAARRIMTQPINLIFRFLQSDLRIEGRIIGFDEYMNLVLDEAEEVSIKKKTRKSLGRILL
KGDNITLMMNLNAGIQGDLAS
NT seq
246 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccggaggattatgacgcaacccatcaatctgatctttcggttccttcagagt
gacttgaggattgaaggccgtataattgggtttgacgagtacatgaatttggttcttgat
gaggccgaggaagtaagcataaaaaagaagaccagaaagtctctaggcaggattctgctg
aaaggagacaatattaccctcatgatgaatttgaatgcaggtattcaaggtgatttggca
agttag
DBGET
integrated database retrieval system
