KEGG   Erigeron canadensis (horseweed): 122578938
Entry
122578938         CDS       T07610                                 
Name
(RefSeq) histone deacetylase 2
  KO
K11418  histone deacetylase 11 [EC:3.5.1.98]
Organism
ecad  Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ecad03036]
    122578938
Enzymes [BR:ecad01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     122578938
Chromosome and associated proteins [BR:ecad03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class IV HDACs
     122578938
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 122578938
NCBI-ProteinID: XP_043606932
LinkDB
Position
8:45574117..45577617
AA seq 389 aa
MYLVHNELYFRFSFILITRTTACQQPLALNSGRRRRHQPLCQSPTMSTPLSTDDEVIRRN
RILSSKLYFDIPLSKAPIIYSTSYDISFLGIEKLHPFDSSKWGRICQFLIANGILDKARI
VEPLEATKDDLLVVHSEAYLNSLKSSLNVSTITEVPPVALFPNCLVQKKVLYPFRKQVGG
TVLAAKLATERGCAINVGGGFHHCCANRGGGFCAYADISLCIHYVFVRLNISRVMIIDLD
AHQGNGHEMDFSNDGRVYILDMYNPYIYPLDYEARRYIDQRVEVPSGTRTEEYLLKLDEA
LLVAANAFDPELVIYNAGTDILDGDPLGKLRISADGITIRDEKVFRFARDKNIPLVMLTS
GGYMKSSARVIADSIINLSNKSLITLSNI
NT seq 1170 nt   +upstreamnt  +downstreamnt
atgtaccttgtgcacaacgaattatactttcgtttttcttttatactcataaccagaacc
accgcatgtcaacaaccgctagcgttaaattcaggccgccgccgacgacatcaaccgctc
tgccagtcaccaaccatgtccactccactttcaaccgacgatgaagttattcgacggaat
cgaattctatcaagcaaactctacttcgacatacccctctctaaggctccaataatctat
tcaacttcttatgacatatcctttctaggaattgaaaaactgcatccatttgactcttct
aaatggggtcgcatatgccagttcctcattgcaaatggcattttggacaaagctcgtata
gtcgagcctctagaagcaaccaaggatgatcttctagtggtgcattctgaagcatacttg
aatagtctcaaaagcagtttaaatgtctccactatcacagaggttcctcctgttgcactg
tttcctaattgccttgttcagaagaaggtcctctaccctttccgtaaacaggtgggagga
actgttctggcggctaaacttgctacagaacgcggatgtgctatcaatgttggtggtggc
ttccaccactgctgtgcaaatcggggaggagggttttgtgcttatgctgacatatctcta
tgcatccactatgtgtttgtccgtctaaatatttcacgggttatgataattgaccttgat
gctcatcaaggaaatggtcatgaaatggatttttcaaatgatggaagagtctatattctg
gatatgtataatccatatatctatccacttgattatgaggccaggagatatattgatcag
agagttgaagttccgagtggaaccaggacagaggagtacttgctgaagctagatgaagca
cttctggttgcagcgaatgcattcgatcctgaactggtgatctacaatgctggaactgat
attttagatggagatcccttaggaaaactgaggattagtgcggatgggataacaattaga
gatgaaaaggtatttaggtttgctcgtgacaagaatatcccactcgtaatgctgacatca
ggtggttatatgaaatcaagtgctagggtgattgccgactcgatcataaacctttcgaac
aaatccttgattactttgagtaacatctaa

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