Erigeron canadensis (horseweed): 122578968
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Entry
122578968 CDS
T07610
Name
(RefSeq) vacuolar protein sorting-associated protein 52 A
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122578968
Membrane trafficking [BR:
ecad04131
]
Protein recycling
Others
EARP complex
122578968
Endosome - Golgi transport
Tethering complex
GARP complex
122578968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
HOOK_N_NuMA
Motif
Other DBs
NCBI-GeneID:
122578968
NCBI-ProteinID:
XP_043606974
LinkDB
All DBs
Position
8:29671537..29681412
Genome browser
AA seq
707 aa
AA seq
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MAEVATEELRKLEDETMDASNSVFSLGAVVGDLTIEEDSSSNDISLEGLQQELEECKTDE
VVANILSKGVKLREYTKGVENNLRQVELDSIQEYITESDNLVSLHDQIRDCDIILSQMET
LLGGFQVEIGSISSDIKILQEKSLDMGLKLKNRKVAESKLAKFVEDIIVPPRMIDIIVDG
EVNDEYLRTLEILSKKLKFVEVDSMVKTANALKDVQPELERLRQKAVSKVFEFMIQKLHA
LRKPKTNIQILQQSILLKYKYVMSFLKEHGKEIYNEVRAAYTDTMNKVLSAHFRAYIQAL
EKLQLDIAGPTDLIGVDTRSTSLFSRGREPLKNRSAIFALGDRISILKEIDEPSLIPHIA
EASSKKYPYEVLFRSLHKLLMDTATSEYVFCGDFFGEESVFNEIFSGPFAVLDEHFGTVL
PNCFDAIGIMLMIRITHQHQLIMSRRRIPCLDSYLDKVNISLWPRFKMVFDMHINSLRNA
NVKTLWEDDVHPHYVMRRFAEFTASLIQLNADYGDGQLDLNMERLKMAMDDLLIKLAKTF
TKPKLQTVFLINNYDMTIAVLKEAGQEGGKIQVHFEELLKNSSAVYVEELLLEHFGSLIK
FVKTRASEDQSSGAGKPITLAEIDPLIKDFASRWKTAIELMHNDVITSFSNFLCGMEILR
AALTQLLLYYTRLTDSRKRVDGENSHNKDIVSMSSIMYEIRKFSRAF
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggtagcaacagaagaactgcgtaaacttgaagatgaaaccatggatgccagt
aactctgtttttagtttgggagccgtagttggtgatttaactattgaagaggattcaagc
agcaatgatatatcattggaagggctacaacaggagctggaagagtgcaaaactgatgag
gttgttgcaaacatactatctaagggtgtgaaactgcgggagtatactaagggagtcgaa
aacaatctacgccaagtagaactggactcaattcaggagtacataacagagagtgataat
ctagtttcccttcatgatcaaattcgtgattgtgacataatactttcacaaatggaaact
ctacttggtgggtttcaggttgagattggctcgatcagttcagacataaaaatacttcaa
gaaaaatctttagatatggggctgaagctcaagaatcgtaaggttgcagaatcgaagtta
gcaaagtttgttgaagacataattgtaccaccaaggatgatagatataattgttgatgga
gaggtgaatgatgaatacctgaggactcttgagattttgagtaagaagctgaagtttgtg
gaagtagattccatggttaaaactgcaaatgctctaaaggatgtgcagcctgagttagaa
aggcttagacagaaagcagtttcgaaggtattcgagttcatgattcagaagctgcatgct
ttgaggaaacctaaaacaaatattcaaattcttcagcagagcatcttgttaaaatataag
tatgttatgtcctttctcaaggagcacgggaaggagatttataatgaagttcgggcagca
tataccgatacaatgaacaaggttttaagtgctcatttccgtgcatatattcaagcgtta
gagaaacttcagctagatatagcaggtcccactgatctgattggtgttgacaccagaagc
acaagccttttttcaagaggaagggagcctttgaaaaaccggtctgctatcttcgctctc
ggagatagaataagcattcttaaggaaatcgacgagccttcgttaattccacatatcgct
gaagcaagctcaaaaaaatatccttatgaagtcctcttcaggagcttacacaagctgctt
atggatactgctacttcagaatatgtcttctgcggtgatttctttggagaagaatctgta
ttcaatgaaatattttcaggaccatttgctgtactggatgagcattttggtacagttctt
ccaaattgctttgatgcaattggtataatgcttatgatccgcataacacaccaacaccag
ctcataatgtctaggagacggattccatgtcttgattcttacttggacaaggtgaatatt
tcgttatggccacgtttcaagatggtttttgacatgcacatcaacagtctgcggaatgca
aatgtgaagacattatgggaggatgatgtgcatccacactatgtcatgcggcgatttgct
gagtttacagcttcacttattcaactgaatgctgactatggggatggccagcttgatctt
aatatggaaagactgaaaatggccatggatgacttgcttattaagctcgccaaaacattc
acaaaaccgaaactgcagacagtttttcttattaataactatgacatgacaattgcagtt
ttgaaggaagcggggcaagaaggtggcaaaattcaggtccattttgaagagcttcttaag
aacagctcagcagtttatgtggaagaattgctgttggaacattttggcagtctgatcaag
tttgtcaaaacgcgagcctccgaggaccagagttctggagctgggaaaccaatcactttg
gcagaaattgatcctctcataaaggattttgctagtagatggaaaacagcgatagagcta
atgcacaatgatgtaataacttcgttcagcaactttctttgtggaatggagattctaaga
gcagccttgacacagcttttactttactatacaagactcacagattccaggaaaagagtc
gatggtgaaaattcccacaacaaggacatcgtctccatgtcatccataatgtatgaaatc
agaaaattctctagggcattttaa
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