Erigeron canadensis (horseweed): 122578985
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Entry
122578985 CDS
T07610
Name
(RefSeq) tRNA modification GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecad03016
]
122578985
Transfer RNA biogenesis [BR:
ecad03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
122578985
Prokaryotic type
Methyltransferases
122578985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
AIG1
GTP_EFTU
Ras
RsgA_GTPase
Roc
Dynamin_N
PUA
Motif
Other DBs
NCBI-GeneID:
122578985
NCBI-ProteinID:
XP_043606994
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All DBs
Position
8:complement(27345983..27352673)
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AA seq
554 aa
AA seq
DB search
MAPLPVLRHVFAHFHHHTSKPIAIIHTFKTLSPLFLSPSHYSLKPISSSQSHFFSTTENT
SILNKDERVRLTSPGVSPPDPDLNSSSTIVAIVTSLGGQASAVGIVRLSGPSAVDIAGRV
FRPFKQRKKKNFSWQPTSHVVEYGVVCDPNGNVVDEVLVVPMLAPRSYTREDVVELQCHG
SDVCLHRVLRACLEAGARLAEPGEFTLRAFLNGRLDLSQAEDVGKLVSAKSVAAADAALA
GIQGGFSSLVNSLRGQCIELLTEIEARLDFDDEMPPLDMGLILSKISAMSHDVDTAMETA
NYDKFLQSGLQIAIIGRPNVGKSSLLNSWSKSERAIVTDIAGTTRDIVEANVTVHGIPVT
LLDTAGIRETDDVVEKIGVERSEAVAMGADVVIMAVSAIDGWTTEDAKLLDKIKRTKAAS
RSPVILAVNKIDCAPSAFTEFVNTIDESFDKHIYTCAITGQGISDLETSILELVGLQNIP
AGGRKWSVNQRQCEQLLRTKEALMRLRTSIEDDLPFDFWTIDLRDAALALGQISGEDISE
EVLTNIFGKFCIGK
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggctcctcttcctgtactccgccatgttttcgcacactttcatcatcatacttcaaaa
cccatagccataatccatacttttaaaaccctttctcctctttttctttccccttctcat
tattcccttaaacccatatcttcctcgcagtctcattttttctccactacagagaatact
tcaatattaaacaaagatgagcgggtcaggttaacttcaccgggtgtaagcccaccagac
ccggatttgaattcgagtagtacaattgtcgccattgttacttctttgggtgggcaggca
agtgcggtaggtattgtaaggttatctggtccatcagcagtggatatagcaggtcgtgtt
tttcgtccatttaagcaaaggaaaaagaagaacttctcttggcaacccacaagtcatgtt
gtagaatatggtgtggtttgtgatccaaatggcaatgttgtcgatgaggttttagttgta
cccatgctggctccaagatcatacacccgagaagatgtagttgagttacaatgtcatggg
agtgacgtttgtctacatcgtgtgctacgagcttgcctagaagccggggcacgacttgca
gaaccaggtgaatttacacttcgtgctttcttgaatggccgtttagacctctctcaagcc
gaagatgttggaaaacttgtatcagccaagtctgtagctgcagccgatgctgcacttgca
ggaattcagggtggtttctcttcactagtgaattcactaagagggcagtgcattgagttg
cttaccgaaatagaagctcgattagattttgatgatgaaatgccaccattagatatgggt
ctgattctgagtaaaataagtgcaatgtcacatgatgtggatactgcaatggaaactgct
aactatgacaagtttttgcaatctggattgcagatcgccattattggccgacccaatgtt
gggaaatctagtttacttaattcatggagtaagagtgaaagagcaatagttacagacatt
gctggaaccacacgggatattgtggaagccaatgtgactgttcacggtattccagtcacg
ctacttgatacagctgggatcagagaaacagatgatgttgtagagaagataggtgttgaa
agatcagaagcagttgccatgggtgctgatgtggttatcatggcagtgagtgctattgat
ggatggacaacagaagatgccaaactgcttgataagataaaacgaaccaaggctgcatcc
agatctccagtgatattagcagtcaacaaaatcgattgtgctccatctgcatttaccgag
tttgtgaacaccatagacgaatcttttgataagcatatatacacatgtgccattaccggt
caaggaatttcagatttggagacttcaattcttgagcttgtaggcctccaaaacattccc
gcaggtggacgcaagtggtccgttaaccagaggcaatgtgagcagcttcttcgaactaag
gaggctttaatgaggttgaggacatcgatagaagatgatcttccatttgatttttggact
atagatttgagggacgctgcacttgcacttgggcagattagtggagaagatatatcagaa
gaagttttgactaatatttttggtaaattctgcattggtaagtaa
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