KEGG   Erigeron canadensis (horseweed): 122578987
Entry
122578987         CDS       T07610                                 
Name
(RefSeq) transportin MOS14 isoform X1
  KO
K15436  transportin-3
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad03013  Nucleocytoplasmic transport
ecad03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    122578987
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    122578987
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ecad03016]
    122578987
Transfer RNA biogenesis [BR:ecad03016]
 Eukaryotic type
  tRNA transport factors
   tRNA import factors
    122578987
SSDB
Motif
Pfam: Xpo1 TPR_TNPO3_IPO13_2nd TPR_TNPO3_IPO13_4th IBN_N TPR_TNPO3_IPO13_3rd
Other DBs
NCBI-GeneID: 122578987
NCBI-ProteinID: XP_043606997
LinkDB
Position
8:38049162..38057616
AA seq 1002 aa
MELQSQVAQAVHVLNHDTQSCNRVSANQWLVQFQQTDAAWEIATSILTCHQSSGFEVEFF
AAQLLKRKIQNEGHCLQLEAKESLVNALLLAAKRFSLGPSQLLTQICLALSTLILHAVEY
YKPIEKLFYSLQNIQGQDDGNMVVLEMLTVLPEVVEDESANYRTKSGQRVDYGPELLSHT
SAVLEFLKQQSEERFDDVVQLHERSRKILRCLLSWVRAGCFSEILPISLLAHPLLNFVFS
SLQVPSSFDLATEVLIELVGRHEGLPQVLICKVGFIKDVLRQAFNGRDEKVISGLACLMS
EIGQAAPSLIIEAHSEALTLVDALLSCVSFPSQDWDIADSTLQFWCCLASNIVRMDFDNS
EHVKDVFSPVFSALLDALLMRSQVDDATYTTETVTRDLPDGLAQFRLNLVELLVDICHLL
RSSAYLQKIFSNGWISSNSSMQIPWKEVETRMFALNAVADVVLHEGQTFDLFMVLHLVTV
LCDRESYEPKGFMCIVHRSLADVIGSYSKWISSYITDVRPLLLFFSAGLSEPLCTHACAT
AFRKFCEDATAVMHKPASLEMLMWITEGLEKRHLPLEDEEDVIGAVTLILGSLPNLELRN
SLLLKLLSSSFGSIRKLIDRDHVHSLRQLPAAYTHLVSSSVRGFFRIETVFSHLVVTPST
CHDIDNSVIVILESFWPLLEKILQSEHIENAGLSMAACRALSQAIKSAGHHFVTLLPKVL
DYLSTNFASFQTHECYIKTASVVVEEFGNKGEYGPLFISTFERFTNASSVMALNSSYVCD
QEPDLVEAYCSFTSIFLHSSSKEVVASSGPLLEVSLQKAAICCTAMHRGAALAAMSYMSC
FLELCVTSLLESMTCNSESPVTSMTVHVISHSGEGLVSNVVYALLGVSAMSRVHKCATIL
QQLAAVCSFAEKTMWKSILCWDSLHGWLHAAVRSLPSEYLRQGEAESLVPVWLKALSDAA
DDYVESRTSDGDRNHKHMRGKGGRILKYLFREFVDSHRNITT
NT seq 3009 nt   +upstreamnt  +downstreamnt
atggagttacaaagccaggtagcacaggcggtacacgtgctgaatcacgatacacaatca
tgtaatcgtgtatcagcaaatcaatggctggttcagtttcagcaaacagatgctgcttgg
gaaattgctacttctattttgacttgtcatcagtcttccggtttcgaagtcgagtttttc
gctgctcagcttcttaaacgaaagatccaaaatgaaggacattgtctgcagctagaagct
aaggaatcactcgttaatgctcttcttctggctgctaaaagatttagtttaggcccgtcc
cagcttttaacacaaatttgtctggctttatctacactgatacttcatgctgtggagtac
tacaagccaattgagaagctcttttacagtcttcagaatattcaaggtcaggatgatggc
aatatggttgttttggaaatgctcacagtattaccagaagttgttgaagatgaatctgct
aattatagaaccaaatcaggtcaaagagttgactatggtccagagttactctcgcataca
tcagcagtgcttgaattcttaaagcagcaatccgaggaaaggtttgatgatgtcgtccaa
ctacatgaaaggagcagaaagatactgcgttgtttgttaagttgggtccgagcaggatgc
ttctcagaaattttaccaatatcattattagcccatccccttcttaattttgttttcagt
tctttgcaggttccatcctcatttgatttagctactgaggttttgattgagctcgttggt
cggcatgagggattgccacaagttcttatatgcaaagtaggatttattaaagatgttctt
cgtcaagcatttaatggcagagatgagaaagtaatcagtggtcttgcttgcttgatgtcg
gagattggtcaggctgccccgagtttgatcatagaagcccactctgaagcactaacactg
gtggatgcacttttgagttgtgtatcatttccaagtcaagattgggatattgcagactca
accttacagttctggtgttgtcttgcaagtaacattgttcgaatggatttcgataatagt
gaacatgttaaagatgttttttccccagtgttttcggcattgcttgatgctcttttaatg
cgttctcaggtggatgatgcaacatatacaactgagactgtaacaagagacttaccagac
gggttggctcaatttagattaaatctagtggagctgttggtggatatttgccacctttta
aggtcttctgcatatctgcagaagattttttctaatggttggatatcttcaaactcaagc
atgcaaattccttggaaggaggtggaaaccagaatgtttgctcttaatgcggttgctgat
gtagtactgcatgagggccaaacatttgatctcttcatggtgttgcacctggtgacagtt
ttatgtgatagggaatcgtatgaaccaaaaggctttatgtgtattgtacatcgatcactt
gcagatgttattggttcttattcgaagtggatttcttcatatataactgatgtcagacca
ttgcttttatttttttcggctggtttgtcagaaccattgtgtacacatgcgtgtgcaact
gccttcagaaagttctgtgaagatgctactgcagtcatgcacaaacctgcaagtttagaa
atgttaatgtggattacagagggattggagaagaggcacctacctctagaagatgaggaa
gatgttattggtgctgttactctgatacttggatcccttcctaacttggagttaagaaac
agtttgttgcttaagttgctttcttctagctttggatccattcgcaaacttattgacagg
gatcatgttcattctttgaggcaactaccagctgcttacactcatcttgtcagttcttca
gtgaggggctttttcaggatagaaactgttttcagtcatcttgtagttacaccttctaca
tgtcatgatatagacaattctgtaattgtcattcttgaaagtttttggcctctccttgag
aaaattttgcagtcagagcatattgagaatgcaggtttatccatggcagcttgcagggca
ctctcacaggcaatcaagtctgcaggtcatcactttgtgacattgttgcccaaagtttta
gattatctatcaacaaattttgcgtcatttcaaactcatgagtgctacattaaaacagct
tccgttgttgtagaagaatttggtaacaagggggaatatggacctttattcatcagtaca
tttgaaagatttacaaatgcatcatcagtaatggctctaaattcttcttatgtatgtgat
caagagcccgatcttgtggaggcttattgtagtttcacatcaatctttcttcacagctct
tcaaaggaagtagtggcttcttctggccctcttttagaagtttcacttcagaaagccgct
atatgttgtacagctatgcatcgtggagcagcactcgcagcaatgtcgtatatgtcgtgt
ttcctagagctttgcgtgacttcattgctggaatcaatgacatgtaactctgaatcccca
gttacatccatgactgttcatgtaatatctcacagtggcgagggacttgtctcaaatgtg
gtttatgctttacttggtgtttcagcaatgtcaagggttcataaatgtgcaactatcttg
caacaattagcggctgtatgcagttttgccgagaaaacaatgtggaaatctattctctgt
tgggattccttacatggatggctgcatgctgcggtgcggagtcttcccagtgagtaccta
cggcagggggaagcagagtccttagtaccggtatggctaaaggcccttagtgatgcagct
gatgattatgttgaaagtagaaccagtgatggagataggaatcataaacacatgcgggga
aagggtggcaggatactcaagtatttatttcgggaatttgttgacagtcatcgtaacatt
acaacgtaa

DBGET integrated database retrieval system