Erigeron canadensis (horseweed): 122579093
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Entry
122579093 CDS
T07610
Name
(RefSeq) two-component response regulator ARR1-like
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122579093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecad03000
]
122579093
Transcription factors [BR:
ecad03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
122579093
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
DNA_pol_phi
NOA36
Motif
Other DBs
NCBI-GeneID:
122579093
NCBI-ProteinID:
XP_043607126
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Position
8:23601527..23606450
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AA seq
605 aa
AA seq
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MNLGSQLLVNKMPSVSSSGAVDVHVSDQFPAGLRVLVVDDDRTCLMILEGMLKKCKYEVT
KCQRAEVALSLLRENRNGYDVVISDVHMPDMDGFKLLVHIGLEMDLPVIMMSADDSQSVV
MKGVTHGACDYLIKPVRIQALRNIWQHVVRKKKHGWKDVEPSTSDGDQYQKQAGDPGYSS
NEGQNGKITKKRKDDEDDDDDEADEREDSSSLKKPRVVWTQELHQQFVKAVHQLGFEKAV
PKKILDLMNVPGLTRENVASHLQKFRLYLRRLSVSQQSGGINNPFMGNQDGGYRSISSLS
EPELQALAASGQLSQLPACSLATLQATAFGRSGNLKSPISVPIVDQKNMFSFENPKLGYV
HSQNWNGQISNTSKQTNPLYGIPVTMEPKQLAGLQRSFSCMNSQVLVPITGQSQSHVLKQ
PVLPGSITSQASPLMDYPMSHKRESIGISFPHGGNVGSSPIMSASNLQQERFVPSYGLSN
NVNHNERQDWGLQGGNMTFNSSQHTNNMQEGLNVLQHNFTSGQNMGGVKEIFSTGERIGT
RVADFPSRAKVENVDYVTSSQSFYPEIYRQDDLTAIFTQRRQQEAILQPENVFGFDWHSV
DNLPA
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttggtagtcaattattagtcaacaaaatgcctagtgtttcctcctccggcgcc
gtagatgtccatgtctccgatcagtttccggctggtctgcgtgtcttagttgttgatgat
gacagaacttgcctcatgatcttagaaggcatgttaaaaaagtgtaaatatgaagtgacg
aaatgccagagagctgaagttgccttatcgttattaagggaaaatagaaatggatatgat
gtggtgattagtgatgttcatatgcctgacatggatggatttaaactacttgtacacatt
ggtcttgaaatggaccttcccgttatcatgatgtcagctgatgacagccagagtgtggta
atgaagggtgttactcacggggcgtgcgattacttaataaaacccgtgcgtatacaggca
ttgcgtaacatctggcagcacgtggttcgaaaaaagaagcatggttggaaggatgttgag
ccatcaactagtgatggtgaccaatatcagaaacaggctggagatcctggctattcatca
aatgaaggacaaaatggtaaaatcacaaagaagaggaaagatgatgaagatgatgatgat
gatgaagcggatgaaagagaagattcttcttcattgaagaaaccacgtgttgtttggaca
caagagcttcatcagcagtttgttaaagctgttcatcagcttggatttgaaaaggctgtc
ccaaagaagattttggacctcatgaatgttcccggactgacacgagaaaatgtcgccagc
catcttcagaaatttcgtctctatcttagaagacttagtgtgtctcagcaatctggtggg
attaacaacccgtttatgggtaaccaagatggaggctacaggtcaatatcatcacttagt
gagcctgaacttcaagctctagcagctagtggtcaactcagtcaactccctgcttgtagt
cttgcaactctccaagccacggcttttggcaggtcgggtaacctgaaatctcctatttcc
gtgcccatagttgatcaaaaaaacatgtttagtttcgagaacccaaaactaggatacgtc
cacagccaaaactggaatgggcaaattagtaataccagcaagcaaacaaatccactttat
ggaattcccgtaactatggagccgaagcagcttgctggtttgcaacgttctttctcatgc
atgaatagtcaagttctagttccaataaccggtcaaagtcaaagtcatgtcttgaaacag
cccgtactacccggttctataacgtcacaagcctcgcctcttatggattatcctatgagt
cacaaaagggagtcaattgggattagttttcctcatgggggaaatgtgggatcttcaccc
attatgtctgcatccaacctccaacaagagcggtttgttccaagttatggtctttcaaac
aatgtgaatcataacgaacggcaagattggggtttacaaggtgggaatatgacctttaac
tcttctcaacatacaaataacatgcaagaaggattgaatgtacttcaacataatttcact
tctggtcaaaatatggggggtgttaaggaaattttctcgacgggcgaacgtattgggacc
cgtgttgccgattttccctcacgggctaaggtggaaaatgttgactatgtgacctctagt
caatcattttatcctgaaatataccgtcaagatgatctaactgcaatttttacacagaga
cggcagcaagaagccattctacagccagaaaatgtatttgggtttgattggcattctgtg
gataatctccctgcataa
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