Erigeron canadensis (horseweed): 122579133
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Entry
122579133 CDS
T07610
Name
(RefSeq) lariat debranching enzyme
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecad03041
]
122579133
03009 Ribosome biogenesis [BR:
ecad03009
]
122579133
Spliceosome [BR:
ecad03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122579133
Ribosome biogenesis [BR:
ecad03009
]
Eukaryotic type
90S particles
RNase
122579133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBR1
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-GeneID:
122579133
NCBI-ProteinID:
XP_043607175
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Position
8:complement(25699932..25708209)
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AA seq
420 aa
AA seq
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MKIAIEGCMHGDLDNVYATLLHLQEVERTKIDLLICCGDFQAVRNENDLESLSVPPKYRS
MNSFWKYYSGEKVAPFPTIFIGGNHEASNYLWELYYGGWAAPDIYFLGFAGVVKFGNIRI
GGLSGIYKSRDYHLGHFERPPYNHNEIKSVYHVREYDVHKLMQVSEPIDIFVSHDWPLGI
TDHGNWEALVQYKPYFEKEIQEKTLGSKPAAELLEKLKPPYWFAAHLHCKFAALVQHGDG
GPVTKFLALDKCIPRRHFLQIIEVESEPGPHEIHYDEEWLAITRKLNSVFPLNARRSNFR
GHVDMEESRQWVKRKLQHRGAKPFEFVRTVPCYNSSQTVANGSLSGHNRNPQTEAFLDLL
ELPYLLDDGEPVNNPTAPIPRGPVDYDSDGPLDYADEIELPEDDDEDEIELPEDDDKYES
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgcaattgaaggatgcatgcatggggatttggataatgtatatgcaactctt
ttgcatttacaagaagttgaaaggacaaaaattgatcttctaatttgctgtggtgatttc
caggctgttaggaatgagaacgatttggaaagcttaagtgtaccacctaaatacaggagc
atgaattctttctggaagtattactcgggagaaaaagtagcaccgtttccaactatattc
atcggaggaaatcacgaagcatctaattacctgtgggaattatactatggaggatgggct
gcccctgatatatacttcttgggatttgcaggagttgtgaagtttggaaacatacgtatt
ggtggcctttctggaatttacaagtcccgcgattatcatttaggacattttgaaaggcct
ccatataaccacaacgagatcaagtcagtataccatgtgagagagtatgatgttcacaag
ctcatgcaagttagtgaacctatagatattttcgtttcacatgattggcctcttggtatc
actgaccatggcaactgggaagctcttgtccaatataaaccttattttgagaaggagatt
caggaaaaaactttgggaagcaaacctgctgctgagttgctagaaaagttaaaacctcct
tactggttcgctgctcacctacattgcaaatttgctgctctagttcaacatggagatgga
ggtcctgtaacaaaatttcttgcactggataagtgtatcccgagaagacattttttgcag
attatcgaagttgaatcggagcctggcccacatgagatacactacgatgaagagtggttg
gcaataactcgtaaactaaattctgtttttcctctgaatgccagacgttcaaattttagg
ggtcatgttgacatggaagaaagtcgtcaatgggtaaagcgtaagctgcaacatagaggg
gcaaaaccttttgagtttgtgcgtacagttccatgttataactcttctcagacagttgct
aatggttccctttctggacataatcggaatccccaaacagaagcttttttagatcttttg
gaacttccataccttcttgatgatggagagcctgttaacaatccaacagcacctattccc
agaggtcctgttgattatgatagtgatggaccccttgattatgcggatgaaatagaactc
ccagaagatgatgacgaggatgaaatagaactcccagaagatgatgataaatatgaatct
tga
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