Erigeron canadensis (horseweed): 122579157
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Entry
122579157 CDS
T07610
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3
KO
K03265
peptide chain release factor subunit 1
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122579157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122579157
03012 Translation factors [BR:
ecad03012
]
122579157
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
122579157
Translation factors [BR:
ecad03012
]
Eukaryotic type
Release factors
122579157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
122579157
NCBI-ProteinID:
XP_043607203
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Position
8:27376785..27381043
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AA seq
436 aa
AA seq
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MSEGQETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN
IKSRVNRQSVLGAITSAQQRLKLYSKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFKPIN
ASLYLCDNKFHTEALNELLESDAKFGFIIMDGNGTLFGTLSGNTKEVLHKFTVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQS
DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILANVKFIQEKRLIGKYFEEISQDTG
KYVFGVDDTLKALEMGAVEILIVWENLDINRYMLKNTTTGEIVIKHLNKEQEADQSNFRD
ADTNAELEVQEKLSLLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDI
RSFDELSDDEAAYESD
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagggtcaagaaacggataagaacattgagatttggaagatcaagaagcttata
aaggcactggaagctgctagaggtaacggcaccagcatgatttcccttatcatgcctcct
cgtgatcagatttctcgagtcaccaagatgctcggtgatgagtttggaactgcttcaaac
atcaagagcagggtgaaccgtcaatctgttttaggtgccattacatctgcccaacagaga
cttaaattatacagcaaggtccctcccaatggactcgtgctttacactggaaccatagtt
acagatgatgggaaagagaaaaaagttacaattgactttgagccattcaagcctattaat
gcttccctttatctatgtgataacaagttccatacagaagctctgaacgagctattagaa
tctgatgccaaatttggtttcatcatcatggatggtaatgggaccctttttggtacgtta
agtggaaatacaaaggaagtgctgcacaaattcacagtcgatttaccaaaaaagcacggc
agaggaggtcaatcagctcttcggtttgcacgtcttcgaatggaaaagcgtcacaactat
gtgagaaaaacggctgagcttgcgacacagtttttcattaatcctgctaccagtcagcct
aatgttgctggacttatacttgcggggtctgctgattttaagactgagttgagccagtct
gatatgtttgatcctcgtctgcaagctaagattttgaatgttgtagatgtctcttatgga
ggtgaaaacggcttcaatcaggccatcgaactgtcagcagaaattcttgctaatgtgaag
tttattcaagagaagcgtttgattggaaagtattttgaagagattagtcaagatactggg
aagtatgtatttggtgtggatgatacactgaaagccttagagatgggtgctgttgaaatt
ctcattgtgtgggagaacctggacataaaccgttacatgcttaagaataccaccacaggt
gaaattgtcataaagcatttgaacaaggaacaggaggctgatcagagtaacttcagagat
gcagacaccaatgctgagctggaagttcaagagaagttgtcattgcttgagtggtttgct
aatgaatacaaaaagtttggatgcacgctcgagtttgtgacaaacaaatctcaagaaggt
tcacaattttgtagggggtttggtggtataggtggcatacttaggtaccagcttgacatt
cggtcttttgatgaactttctgatgatgaagcagcatatgaatcagattag
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