Erigeron canadensis (horseweed): 122579172
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Entry
122579172 CDS
T07610
Name
(RefSeq) pectate lyase 1-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00040
Pentose and glucuronate interconversions
ecad01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122579172
Enzymes [BR:
ecad01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
122579172
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
122579172
NCBI-ProteinID:
XP_043607220
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Position
8:complement(40213501..40215597)
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AA seq
409 aa
AA seq
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MPSILARSPDDDKTIADVVDYGGESGMDDKNAAYNPEQFPGKYSGDVEASITEKNSTRRG
LNECATKNPIDKCWRCKADWADNREALTQCVIGFGAGTTGGAGGEVYTVTDPSDDTPESP
KEGTLRYGATQNKPVWIIFEKDMVITLKHALPVTSDTTIDGRGAKVEIAFGAGISVHTVK
NVIIHGIHIHDTKESPGYAGKTGCDGDAVAVKTSSKIWVDHCTFSGGVDGLLDVTVGSTG
VTLSNNKFSDHDKIMLLGADDSHAEDKAMLTTVAYNKFDQGCVQRMPRCRHGFFQVVNND
YNKWGLYAIGGSAAPTILSQGNKFVAPDAADKKNVLQRSDAPESEWQNWNWRTDSNDVLE
NGAVFTASGSDPQLSAEQQAGMIPVEPGSNVPQLTSCAGALSCVVGQPC
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgccatctattctagctcggtcacccgacgatgacaagaccattgcagatgtcgtggac
tacggtggcgaaagtggtatggatgataagaatgccgcatataaccctgagcaattccct
ggaaaatattctggagatgtcgaagcgtcaataacggaaaagaactcaacaaggagaggc
ctaaatgaatgtgcgaccaaaaatccaatagacaagtgttggaggtgcaaagcagattgg
gcggacaaccgagaagcattaacccaatgtgtgattggtttcggagcaggaaccactggt
ggcgcgggcggggaagtctacacggtgactgatccatcagacgatacccctgagagtccc
aaggaagggacgttgcgttatggtgctacccaaaacaaacctgtttggatcattttcgaa
aaagatatggtcattactttgaaacacgcacttccagtcactagtgacacgactattgat
ggtagaggtgcgaaagtggagatcgcttttggtgcaggcatcagcgtccatactgtcaaa
aatgtcatcattcatgggattcacattcacgatacaaaagaatcgccaggttatgcaggg
aaaacaggttgtgatggtgatgctgttgctgttaagacttcttccaagatatgggtcgac
cactgcacgtttagtggaggtgtagatgggctcctagatgtcactgttggtagcacaggc
gtaacactttctaacaacaaattcagcgatcacgacaaaatcatgttgctcggggcagat
gatagccacgctgaagataaagcaatgttaaccacggttgcgtataacaagtttgatcaa
ggatgcgtccaaagaatgcctagatgtcgacatggctttttccaagtcgtcaacaacgac
tacaacaaatggggattgtatgctatcggtggtagtgcagctcctactatccttagccaa
ggcaacaaattcgtggctccagatgcggctgacaagaaaaatgtgctacaaaggagtgat
gctccagaatcagaatggcagaattggaactggagaacagattcaaatgatgtattggag
aatggagctgtctttacggcatccgggtctgacccacagctaagtgctgaacaacaagcc
ggtatgattccagttgaaccaggatccaacgttccacaactcaccagttgtgctggtgca
ctctcatgtgtggtcggccaaccttgttaa
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