Erigeron canadensis (horseweed): 122579203
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Entry
122579203 CDS
T07610
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase MINDY-3
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122579203
Enzymes [BR:
ecad01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122579203
Ubiquitin system [BR:
ecad04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
122579203
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
UIM
UIM_2
Motif
Other DBs
NCBI-GeneID:
122579203
NCBI-ProteinID:
XP_043607253
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Position
8:28187546..28195971
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AA seq
615 aa
AA seq
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MEDVEDDLQKALRMSMQGESPEPKRSKDTPAAAADDVSPRRLQRELMAAAAEKRMMAASV
SAARDVNVGTSSSSGSGSGSVVKNVAVSETKKAEKRVEPEEKKRSLGEELSVEEAEKLFS
MVFGNEVSKGILAQWSNQGIRFSPDEETSMGLVQHEGGPCGVLAAIQAFVLKYLLFFPQE
LVKALPNSPLKSVSRRLQDTQDPVSNIFGSLTEETKSRALVRSMCEILFLCGNNNSATIA
SLRILDCEIEGKDESSKDENVARSLEGLSIESSSDLQKVLTVCTFTSPTSAMQRLEEMIP
IFRSRMGALLFLLSALLSRGLDTVQDDRDDPTQPLVTAPFGHASQEIVNLLLSGMAVANV
FDGKMDLGGGMFVKGILRSVEVGFLTLLESLNYCKVGQSLKYPKWPIWVVGSESHYTILF
ALDPHVQDENEFEGRETTIRRAFDAQDQSGGGGFISVEGFHQVLKDAKVNLPTEKVNHLC
GSGFIVWSEFWQVLLDLDTSLGGLKDSTGLMGKKVFDLYHFNGIAKSVTGSEIPVQRPRL
TKLRVSVPPRWTPEEFMANVSLPGSSSGADSSGSKDALVEVSKPERTQHAPLVDCIRTRW
ARAVCNWEGDPPSIV
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgtggaagatgatctgcaaaaggcgttacggatgagtatgcaaggggaatcg
ccggagccgaaacggagtaaagatactcctgccgcggcggcggatgacgtgtcgccgcgg
aggttgcagagggagttgatggctgccgctgccgagaaacgaatgatggcggcttcggta
tcggctgctagggatgtgaatgttggtactagtagtagtagtggtagtggaagtggtagt
gtggtgaaaaatgttgcggtttcggagacgaagaaggcggaaaagcgagtggagccggaa
gagaaaaagaggagtttgggggaagagttgtcggtggaggaagccgagaagttgttttcg
atggtgtttgggaatgaggttagcaagggcattcttgcacaatggagtaatcaggggatt
aggtttagtcctgatgaggaaacatcaatgggcttggttcagcatgaaggtggtccatgt
ggtgtattagcagctatacaagcatttgttcttaaatacctcttgtttttcccacaagag
ctagttaaagcattgccaaattcaccattgaaatcagtttcaagaagattgcaggatact
caagatcccgtgtcaaatatctttgggtccctaactgaagaaacaaaatcgagagccttg
gtgaggagtatgtgtgagatattatttctatgtggaaacaataacagcgcgacaattgca
tctcttaggattcttgattgtgagattgagggtaaagatgaaagctcaaaagatgagaat
gttgcaagatctctcgaaggcctttcaatagaatccagcagtgatcttcagaaagttttg
acagtttgcacattcacatctcccacaagtgcaatgcagagacttgaagagatgattcca
atatttcgtagtcgtatgggggcactgctatttctgctgtctgctttgctctctcgagga
ctggatactgttcaagatgatagggatgatccaacccaacctttagttaccgctccgttt
gggcatgcttcgcaggaaattgtcaaccttttgctttctggtatggccgttgccaatgtt
tttgacggaaaaatggacttaggtggtggcatgtttgttaaaggtattctaagatccgta
gaagttggatttcttactttactagaatccctcaactattgtaaagtcggacaatcattg
aaatacccaaagtggcctatttgggttgtgggaagcgagtctcattacaccatcctattt
gctctcgatcctcacgttcaagatgaaaatgaatttgaagggagagaaacgacaatccgt
agagcattcgatgcacaagatcaaagtggtggtggtggttttataagtgtagaagggttc
catcaagttctcaaagatgcaaaagtgaatcttcctactgaaaaggtcaaccatctctgt
ggttcgggatttattgtatggagtgagttctggcaagtgcttttggatttagatacaagt
ctaggaggattaaaggactcgacaggtttgatgggcaaaaaggtcttcgacctttatcat
tttaatgggattgctaaatcagtgacaggaagcgagattcccgtacaaagaccacgactt
acaaagttgcgggtctcagttccaccaaggtggaccccagaagaatttatggctaacgtg
tcactacctggctctagttcgggagctgatagttcagggagcaaagatgcactggttgaa
gtgtcaaaacctgagcgcactcaacatgctcctctggtggactgcattagaacgcggtgg
gctcgagccgtttgcaattgggaaggggacccacctagcatagtttga
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