Erigeron canadensis (horseweed): 122579375
Help
Entry
122579375 CDS
T07610
Name
(RefSeq) RING-H2 finger protein ATL58-like isoform X1
KO
K19039
E3 ubiquitin-protein ligase ATL7/58/59 [EC:
2.3.2.27
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122579375
Enzymes [BR:
ecad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122579375
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
122579375
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
zf-RING_16
zf-RING-like
Prok-RING_1
zf_RING_Vps8_fungal
zf-C3HC4_3
zinc_ribbon_16
RINGv
zf-RING_4
Zn_ribbon_IFT122_C
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
122579375
NCBI-ProteinID:
XP_043607475
LinkDB
All DBs
Position
8:29663801..29667770
Genome browser
AA seq
196 aa
AA seq
DB search
MSCTTTSTINPETNTTNCWNWKKALSAQVKLFRGFAFAFTLVFTLLLLLSFYLFYLRLRR
LRRTPPWPVSSPASNAISNVELGVKKELREMLPVIVFKESFSVTDTLCSVCLGDYQAEDR
LQQIPACKHAFHVECIDSWLSTHTTCPLCRLSLLASSPTEPKAITEATSTNAENSTGTSL
RIENCGPSSIDSEVIR
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgtacaacaacatcaacaatcaatccagaaaccaacacaacaaattgttggaat
tggaaaaaagcattatcagctcaagttaagctctttagaggttttgcctttgctttcact
cttgttttcactttactccttttactctccttttatctcttctatcttcgcctccgccgt
ctccgccgtacgccgccgtggccggtatcttctcccgcttccaacgctatatccaatgtt
gagttaggggtgaagaaagaactgagggaaatgctgcccgttattgtgtttaaggagagc
ttttctgttaccgatacattatgttcggtatgtcttggggactaccaggcagaggatagg
ctgcaacagataccagcttgcaagcatgcatttcatgtggaatgcattgatagctggctt
tcgactcacactacatgccctctttgccgtctctctcttcttgcttcttctccaactgaa
ccaaaagcaataaccgaggctacatctaccaatgcagaaaatagtacgggtacatctctg
cggattgaaaattgtggcccgtcttcaatagattccgaggttatccgatag
DBGET
integrated database retrieval system
